Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01667 and RBAM_009970

See Amino acid alignment / Visit BSNT_01667 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:20
# Commandline: needle
#    -asequence dna-align/BSNT_01667___yheF.1.9828.seq
#    -bsequence dna-align/RBAM_009970___yheF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01667___yheF-RBAM_009970___yheF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01667___yheF-RBAM_009970___yheF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01667___yheF
# 2: RBAM_009970___yheF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 130
# Identity:     100/130 (76.9%)
# Similarity:   100/130 (76.9%)
# Gaps:           8/130 ( 6.2%)
# Score: 370.0
# 
#
#=======================================

BSNT_01667___      1 GTGTCATTCATCACCATTGTGAATTGGGAGCTGGTTCAGTTCGTAAGTGT     50
                     .||||||||||..||...||.||||||||||||.||||||||||||||||
RBAM_009970__      1 ATGTCATTCATTGCCTCAGTCAATTGGGAGCTGTTTCAGTTCGTAAGTGT     50

BSNT_01667___     51 ATCCATGATTCATGAATATGTTTCCCATCGTT--CTGTTTATTTGTACAG     98
                     .||..||.|..|||||||||||.||||.|.||  |.|||||||  .||||
RBAM_009970__     51 TTCTTTGGTCAATGAATATGTTGCCCACCATTTCCCGTTTATT--CACAG     98

BSNT_01667___     99 GTATTCTTTCCCGCGCTG--TTCAAACTGA    126
                     |||||||||.||.|||||  ||.||  |||
RBAM_009970__     99 GTATTCTTTTCCCCGCTGCTTTGAA--TGA    126


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