Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01443 and RBAM_008790
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:09
# Commandline: needle
# -asequence dna-align/BSNT_01443___ygaE.1.9828.seq
# -bsequence dna-align/RBAM_008790___ygaE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01443___ygaE-RBAM_008790___ygaE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01443___ygaE-RBAM_008790___ygaE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01443___ygaE
# 2: RBAM_008790___ygaE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1071
# Identity: 860/1071 (80.3%)
# Similarity: 860/1071 (80.3%)
# Gaps: 15/1071 ( 1.4%)
# Score: 3423.0
#
#
#=======================================
BSNT_01443___ 1 ATGAAACTTGGTGCCCGCATTTTCAAAACCGGGATTGCGATTACACTTGC 50
|||||||||||||||||||||||.|||||.||||||||||||||.||.||
RBAM_008790__ 1 ATGAAACTTGGTGCCCGCATTTTTAAAACAGGGATTGCGATTACGCTCGC 50
BSNT_01443___ 51 CCTTTATTTGGCTTCGTGGATCGGGCTTCCCGCGCCGATTTTCGCTGGAA 100
.||.||.||.||.||.||||||||.|||||..|||||||.||.||.||.|
RBAM_008790__ 51 GCTCTACTTAGCATCATGGATCGGACTTCCGTCGCCGATCTTTGCCGGGA 100
BSNT_01443___ 101 TTGCAGCGATATTTGCGATCCAGCCGTCGATTTACCGCTCTTTTCTCATT 150
|||||||.||||||||.||.|||||.||.||||||.|.||||||||.||.
RBAM_008790__ 101 TTGCAGCTATATTTGCCATACAGCCCTCTATTTACAGGTCTTTTCTTATC 150
BSNT_01443___ 151 ATTATTGACCAGGTTCAAGCAAATATCATCGGAGCTGTGATTGCCACAGT 200
||||||||.||||||||.||||||||||||||.|||||.||.||.||.|.
RBAM_008790__ 151 ATTATTGATCAGGTTCAGGCAAATATCATCGGCGCTGTCATCGCTACGGC 200
BSNT_01443___ 201 GTTCGGCCTTATTTTCGGACCCAGCCCGATTATGATCGGGTTAACAGCAG 250
.|||||.||.|||||||||||.||.||||||||||||||.||.||.||||
RBAM_008790__ 201 ATTCGGACTGATTTTCGGACCGAGTCCGATTATGATCGGATTGACCGCAG 250
BSNT_01443___ 251 TTATTGTCATTACAATCATGCTGAAACTTAAAATTGAACATACAATTTCA 300
|.||||||||.||.||||||.|.|||||.|||||||||||.||.|||||.
RBAM_008790__ 251 TGATTGTCATCACGATCATGTTAAAACTGAAAATTGAACACACCATTTCG 300
BSNT_01443___ 301 ATTGCTCTTGTAACAGTTATTGCGATATTAGAATCCGCCGGTGACGACTT 350
|||||.||.||.||.|||||.||.||.||||||.|..|.||..||..|||
RBAM_008790__ 301 ATTGCGCTCGTGACGGTTATCGCAATTTTAGAAACACCGGGAAACAGCTT 350
BSNT_01443___ 351 TTTAATGTTCGCGCTGATCAGAACAAGCACAGTCATCTTAGGGGTGCTTT 400
..|.|.||||||.|||||..||||||||||.||.||.|||||.|||||.|
RBAM_008790__ 351 CCTGACGTTCGCTCTGATACGAACAAGCACCGTTATTTTAGGCGTGCTGT 400
BSNT_01443___ 401 CTTCCTTTATCGTCAACCTTGTGTTTTTGCCTCCTAAGTACGAAACAAAG 450
||||.|||||.||.||||||||||||.|.||.||.||.||||||||.|||
RBAM_008790__ 401 CTTCTTTTATTGTGAACCTTGTGTTTCTTCCGCCGAAATACGAAACGAAG 450
BSNT_01443___ 451 CTGATTCATAATACCGTCGAAAACACCGAAGAAATTATGAAGTGGATCAG 500
||||.||||.||||.||.|||.|.|||||.||.||.|||||.||||||||
RBAM_008790__ 451 CTGACTCATCATACGGTTGAATATACCGATGAGATCATGAAATGGATCAG 500
BSNT_01443___ 501 ATTGTCCATGCGGCAGTCGACAGAGCATTCGATTTTGAAAGAGGATATTG 550
..||.|.|||||.|||||.||.||.||.|||||.||||||||||||||||
RBAM_008790__ 501 GCTGACGATGCGTCAGTCCACGGAACACTCGATATTGAAAGAGGATATTG 550
BSNT_01443___ 551 AAAAACTGAAAGAAAAAATGATCAAGCTTGATCAGACATATCTTCTATAT 600
|.||.|||||.|||||.|||||.|||||||||||.||.||.|||||.|||
RBAM_008790__ 551 AGAAGCTGAAGGAAAAGATGATGAAGCTTGATCATACGTACCTTCTTTAT 600
BSNT_01443___ 601 AAAGAAGAAAGAAGTTACTTTAAGAAAACGACTTATGTGAAATCAAGAAA 650
|||||.||.|||||.|||||||||||||||||.|||||.||.||..|.||
RBAM_008790__ 601 AAAGAGGAGAGAAGCTACTTTAAGAAAACGACGTATGTAAAGTCGCGCAA 650
BSNT_01443___ 651 GCTTGTCCTGTTCAGACAGGCCATTATTACTGCAAATCGGGCGCTTGATA 700
||||||..|||||||||||||.||||||||.||.||||||||||||||.|
RBAM_008790__ 651 GCTTGTATTGTTCAGACAGGCGATTATTACGGCGAATCGGGCGCTTGACA 700
BSNT_01443___ 701 CATTGAAGAAGCTGCATCGTCT-GGAAAACGAGATCTATCATATGCCGGA 749
|..||||.||||||||.|| || .|||||||||||.|||||||||.||||
RBAM_008790__ 701 CGCTGAAAAAGCTGCACCG-CTATGAAAACGAGATTTATCATATGGCGGA 749
BSNT_01443___ 750 AGAGTTTCAGGAAACACTGACTGAAGAACTTGATTACCTGCTTTACTGGC 799
.||.||||||||.||.|||||.||||||.|||||||.||||||.|.||||
RBAM_008790__ 750 GGAATTTCAGGAGACGCTGACAGAAGAAATTGATTATCTGCTTCATTGGC 799
BSNT_01443___ 800 ACGAACGGATTTTGATGAGGTTTGTCGGAAAAATCAAGCCGCATGATGAC 849
|.|||.|||||.|||||.||...|||||.||.|||||.||||||||||||
RBAM_008790__ 800 ATGAAAGGATTCTGATGCGGACGGTCGGCAAGATCAAACCGCATGATGAC 849
BSNT_01443___ 850 GCGGTTGAAGAAGGCATCCAG-TATAAGCAGCTTTTAACAAAGTCATTTT 898
|..|.|||||||.|||| .|| |||||.||||||||.||.|||||.||.|
RBAM_008790__ 850 GATGCTGAAGAAAGCAT-AAGATATAAACAGCTTTTGACGAAGTCTTTCT 898
BSNT_01443___ 899 TAAAAAATCAGCA-AAATACGGATGAGGAGCTTATTGATTACAACATGCT 947
|.||||||||||| ||.|.| ||.||.||.||..||||||||||.|||||
RBAM_008790__ 899 TGAAAAATCAGCAGAACTGC-GAGGATGAACTGCTTGATTACAATATGCT 947
BSNT_01443___ 948 CAATATTATGGCAAGCGCCGT---GGAATATCGCGAGCAGCTTGAACATT 994
||..|||||||| .||.|| ||||||.|||||||||||.||.|||.
RBAM_008790__ 948 CAGCATTATGGC---TGCGGTTGCGGAATACCGCGAGCAGCTGGAGCATC 994
BSNT_01443___ 995 TAGAAACACTTATCACAAGTTTTCAAACGTATCATCCGAAAGACTGCGAA 1044
|.||.|||.|.||.||.||||||||.||.||.||.|||||||||.|||||
RBAM_008790__ 995 TCGATACATTAATTACGAGTTTTCAGACATACCACCCGAAAGACAGCGAA 1044
BSNT_01443___ 1045 ATAGAAACA---GAAGAGTAA 1062
.|||||||| |||||||||
RBAM_008790__ 1045 TTAGAAACAGACGAAGAGTAA 1065
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