Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01133 and RBAM_007020
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:50
# Commandline: needle
# -asequence dna-align/BSNT_01133___ligA.1.9828.seq
# -bsequence dna-align/RBAM_007020___ligA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01133___ligA-RBAM_007020___ligA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01133___ligA-RBAM_007020___ligA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01133___ligA
# 2: RBAM_007020___ligA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2013
# Identity: 1683/2013 (83.6%)
# Similarity: 1683/2013 (83.6%)
# Gaps: 9/2013 ( 0.4%)
# Score: 7071.0
#
#
#=======================================
BSNT_01133___ 1 ---ATGGACAAAGAAACAGCGAAGCAGCGGGCAGAAGAACTGCGCCGCAC 47
||||||||||||||||||||.||.||||||||||||.||||||||||
RBAM_007020__ 1 ATGATGGACAAAGAAACAGCGAAACACCGGGCAGAAGAATTGCGCCGCAC 50
BSNT_01133___ 48 CATCAACAAGTATAGCTATGAATATTACACCCTAGATGAACCGAGCGTCC 97
||||.|..||||.||.|||||||||||||||.||||||||||||||||.|
RBAM_007020__ 51 CATCGATCAGTACAGTTATGAATATTACACCTTAGATGAACCGAGCGTGC 100
BSNT_01133___ 98 CTGATGCGGAATATGACAGATTGATGCAGGAGCTGATCGCGATCGAGGAG 147
|.|||.|.||.||.||||||.||||||||||||||||.||.||.|||||.
RBAM_007020__ 101 CGGATTCCGAGTACGACAGACTGATGCAGGAGCTGATTGCCATAGAGGAA 150
BSNT_01133___ 148 GAGCATCCAGATCTCAGAACGCCTGACTCTCCTACGCAGCGCGTCGGCGG 197
|||||.||.||.||||||||||||||.||.||.||.|||||.|||||.||
RBAM_007020__ 151 GAGCACCCGGAACTCAGAACGCCTGATTCGCCCACACAGCGGGTCGGGGG 200
BSNT_01133___ 198 AGCCGTGCTTGAAGCGTTTCAAAAAGT-CACCCACGGCACACCGATGCTC 246
|||.|||||||||.||||||||||.|| || .||.|||||.|||||||||
RBAM_007020__ 201 AGCGGTGCTTGAATCGTTTCAAAAGGTGCA-GCATGGCACGCCGATGCTC 249
BSNT_01133___ 247 AGTCTGGGCAACGCCTTTAATGCTGATGATCTTCGTGATTTCGACCGCCG 296
|||||.||||||||.|||||.|.||||||.||.||.|||||.||||||||
RBAM_007020__ 250 AGTCTCGGCAACGCATTTAACGATGATGACCTCCGCGATTTTGACCGCCG 299
BSNT_01133___ 297 TGTGCGCCAAGCCGTCGGTGACGATGTGGCGTATAATGTGGAGCTGAAAA 346
.||.||.||.||.||||||||||..||.||.|||||||||||||||||||
RBAM_007020__ 300 CGTCCGTCAGGCTGTCGGTGACGGCGTCGCTTATAATGTGGAGCTGAAAA 349
BSNT_01133___ 347 TAGACGGTCTTGCTGTTTCTCTCCGTTATGAAGACGGCTATTTTGTCAGA 396
|||||||||||||||||||||||||||||||||||||||||||.||||||
RBAM_007020__ 350 TAGACGGTCTTGCTGTTTCTCTCCGTTATGAAGACGGCTATTTCGTCAGA 399
BSNT_01133___ 397 GGGGCCACCCGAGGTGACGGAACGACGGGAGAGGATATTACGGAGAATCT 446
||.||.||..||||.||||||||||||||.||.|||||.|||||.||..|
RBAM_007020__ 400 GGCGCGACAAGAGGAGACGGAACGACGGGCGAAGATATCACGGAAAACTT 449
BSNT_01133___ 447 GAAGACGATTCGCAATATCCCCCTCAAAATGAACCGTGAGCTGTCGATCG 496
.||.|||||.|||||.||.||.||.||||||||.||..|.||.||.||.|
RBAM_007020__ 450 AAAAACGATCCGCAACATTCCGCTGAAAATGAAACGGAATCTTTCCATAG 499
BSNT_01133___ 497 AAGTGCGCGGCGAGGCGTATATGCCGAAGCGTTCGTTTGAAGCACTCAAT 546
||||||||||.||||||||.||||||||.|..||.||||||||.||||||
RBAM_007020__ 500 AAGTGCGCGGAGAGGCGTACATGCCGAAACAGTCATTTGAAGCGCTCAAT 549
BSNT_01133___ 547 GAGGAACGGATTAAAAATGAGGAAGAACCGTTCGCCAATCCGCGAAATGC 596
||.|||.||.|.|||.||||.||.||.||||||||||||||.||.|||||
RBAM_007020__ 550 GAAGAAAGGCTGAAACATGAAGAGGAGCCGTTCGCCAATCCCCGGAATGC 599
BSNT_01133___ 597 CGCGGCGGGATCACTTAGGCAGCTCGATCCGAAAATTGCAGCGAAACGAA 646
.||.|||||.|||||.||.|||||||||||||||||||||||||||||||
RBAM_007020__ 600 GGCTGCGGGCTCACTCAGACAGCTCGATCCGAAAATTGCAGCGAAACGAA 649
BSNT_01133___ 647 ACCTCGATATCTTCGTCTACAGTATAGCGGAGCTTGACGAGATGGGTGTG 696
|.||.||.||||||||||||||||||||||||||||||||.|||||||||
RBAM_007020__ 650 ATCTTGACATCTTCGTCTACAGTATAGCGGAGCTTGACGAAATGGGTGTG 699
BSNT_01133___ 697 GAGACGCAAAGCCAAGGGCTTGATTTTCTCGACGAACTCGGATTTAAAAC 746
||.||.||.||.|||||.||.||||||||.||.||.|||||.||||||||
RBAM_007020__ 700 GAAACACAGAGTCAAGGCCTGGATTTTCTGGATGAGCTCGGTTTTAAAAC 749
BSNT_01133___ 747 GAATCAGGAACGAAAAAAATGCGGCGAC-ATAGAAGAAGTCATTACGCTG 795
.||.||||||||.||||||||| ||.|| |||||.|||||||||....||
RBAM_007020__ 750 AAACCAGGAACGGAAAAAATGC-GCCACGATAGATGAAGTCATTGAAATG 798
BSNT_01133___ 796 ATCGATGAGCTTCAGGCGAAGCGCGCTGACCTGCCGTATGAAATAGACGG 845
|||||.|||||.|||||||||||.||.||.||.|||||||||||.|||||
RBAM_007020__ 799 ATCGAAGAGCTGCAGGCGAAGCGGGCCGATCTCCCGTATGAAATTGACGG 848
BSNT_01133___ 846 CATTGTTATTAAAGTCGATTCTCTCGATCAACAGGAGGAGCTCGGTTTTA 895
.||.||.||.|||||||||||.|||||.||.|||||.||||||||.|.||
RBAM_007020__ 849 AATCGTCATCAAAGTCGATTCGCTCGACCAGCAGGAAGAGCTCGGGTATA 898
BSNT_01133___ 896 CGGCGAAAAGCCCGCGCTGGGCCATCGCGTATAAGTTTCCTGCTGAAGAG 945
||||.|||||||||||||||||.||.||||||||.||.||.||.||||||
RBAM_007020__ 899 CGGCAAAAAGCCCGCGCTGGGCGATTGCGTATAAATTCCCGGCGGAAGAG 948
BSNT_01133___ 946 GTCGTGACGAAGCTTCTCGATATCGAATTAAATGTCGGCAGAACGGGTGT 995
||||||||.||.||.||||||||||||.|.||||||||.||||||||.||
RBAM_007020__ 949 GTCGTGACAAAACTGCTCGATATCGAACTGAATGTCGGAAGAACGGGCGT 998
BSNT_01133___ 996 GATCACGCCGACCGCGATTCTTGAGCCGGTAAAAGTTGCCGGCACAACGG 1045
.||.|||||||||||..||||.||.|||||||||||.||.||.||.||||
RBAM_007020__ 999 CATTACGCCGACCGCCGTTCTGGAACCGGTAAAAGTCGCGGGAACGACGG 1048
BSNT_01133___ 1046 TCTCAAGAGCATCCCTTCATAACGAAGATTTAATTAAAGAGAAGGACATT 1095
||||||||||||||||||||||||||||||||||||||||||||||.||.
RBAM_007020__ 1049 TCTCAAGAGCATCCCTTCATAACGAAGATTTAATTAAAGAGAAGGATATC 1098
BSNT_01133___ 1096 CGGATTTTGGATAAGGTTGTCGTCAAAAAAGCGGGCGATATCATCCCGGA 1145
||.|||.|.|||||.||.||||||||||||||||||||.||||||||.||
RBAM_007020__ 1099 CGCATTCTCGATAAAGTGGTCGTCAAAAAAGCGGGCGACATCATCCCTGA 1148
BSNT_01133___ 1146 AGTTGTGAATGTCCTCGTTGAACAGCGCACAGGAGAAGAAAAGGAATTCA 1195
.||.||.||||||.|..|.||||||||.||.||.||||||||.|||||||
RBAM_007020__ 1149 GGTCGTCAATGTCTTAATCGAACAGCGGACCGGGGAAGAAAAAGAATTCA 1198
BSNT_01133___ 1196 GCATGCCGACGGAATGTCCTGAATGCGGCAGTGAACTCGTCCGGATCGAA 1245
..||||||||.|.|||.|||||.||||..||.|||||.|||||.||.|||
RBAM_007020__ 1199 ATATGCCGACCGGATGCCCTGAGTGCGAAAGCGAACTTGTCCGCATTGAA 1248
BSNT_01133___ 1246 GGAGAAGTGGCGCTTCGCTGCATTAACCCTGAATGTCCGGCGCAAATCCG 1295
||||||||.|||||.||||||||.||.||.||||||||||||||.|||.|
RBAM_007020__ 1249 GGAGAAGTCGCGCTGCGCTGCATCAATCCGGAATGTCCGGCGCAGATCAG 1298
BSNT_01133___ 1296 GGAAGGGCTTATCCATTTCGTTTCCCGCAATGCCATGAACATTGATGGGC 1345
.|||||.||.||.||.||.||.||.|||||.||.|||||.|||||.||.|
RBAM_007020__ 1299 AGAAGGCCTGATTCACTTTGTCTCACGCAACGCGATGAATATTGACGGAC 1348
BSNT_01133___ 1346 TCGGCGAACGAGTGATCACACAGCTGTTTGAG-GAAAACCTTGTCCGCAA 1394
||||.|||||.||.||||||||||| |||..| |||.|.||.|||||.||
RBAM_007020__ 1349 TCGGAGAACGTGTCATCACACAGCT-TTTCCGTGAACATCTCGTCCGTAA 1397
BSNT_01133___ 1395 TGTGGCAGATTTATATAAGCTGACGAAGGAACGAGTCATCCAGCTCGAGC 1444
|||.||.|||||.||||||||||||||.||.|..|||||||.|||.||||
RBAM_007020__ 1398 TGTCGCTGATTTGTATAAGCTGACGAAAGAGCAGGTCATCCGGCTTGAGC 1447
BSNT_01133___ 1445 GCATGGGCGAAAAGTCCACTGAAAACCTGATCAGCTCCATCCAAAAATCA 1494
|.|||||.|||||.||.|||||.||.||||||||||||||||||||.||.
RBAM_007020__ 1448 GGATGGGGGAAAAATCAACTGACAATCTGATCAGCTCCATCCAAAAGTCG 1497
BSNT_01133___ 1495 AAAGAAAATTCGTTAGAGCGCCTGCTGTTTGGGCTTGGCATCCGTTTTAT 1544
|||||.||||||.|.||.|||||||||||.||.||.||||||||||||||
RBAM_007020__ 1498 AAAGAGAATTCGCTGGAACGCCTGCTGTTCGGTCTCGGCATCCGTTTTAT 1547
BSNT_01133___ 1545 CGGATCAAAGGCCGCAAAGACGCTTGCCATGCATTTTGAAAGCTTGGAGA 1594
|||.|||||.||.||.||.||.||.||||||||||||||||||.||||.|
RBAM_007020__ 1548 CGGCTCAAAAGCGGCCAAAACACTCGCCATGCATTTTGAAAGCCTGGAAA 1597
BSNT_01133___ 1595 ACCTGAAAAAAGCCTCTAAAGAGGAACTTCTCGCGGTAGATGAAATCGGT 1644
|.||||||.|||.|.|..||||.||.||.||.|||||.|||||||||||.
RBAM_007020__ 1598 ATCTGAAACAAGTCACGGAAGAAGAGCTGCTTGCGGTGGATGAAATCGGC 1647
BSNT_01133___ 1645 GAAAAAATGGCTGATGCTGTGATCACCTATTTTCATAAAGAAGAAATGCT 1694
|||||.|||||.|||||.||.|||||||||||.|..||||||||||||||
RBAM_007020__ 1648 GAAAAGATGGCCGATGCCGTTATCACCTATTTCCGCAAAGAAGAAATGCT 1697
BSNT_01133___ 1695 TGAACTCTTGAATGAACTTCAGGAGCTGGGCGTAAACACGCTCTACAAAG 1744
|||.||.||||||||||||.||||.||.||.||.|||||.||||||||||
RBAM_007020__ 1698 TGAGCTATTGAATGAACTTGAGGAACTCGGTGTGAACACACTCTACAAAG 1747
BSNT_01133___ 1745 GCCCGAAAAAAGTAAAAGCAGAGGACAGCGACTCTTACTTTGCCGGTAAA 1794
|||||||||||||||||||.|||||||||||||||||.||||||||.|||
RBAM_007020__ 1748 GCCCGAAAAAAGTAAAAGCGGAGGACAGCGACTCTTATTTTGCCGGCAAA 1797
BSNT_01133___ 1795 ACAATTGTTCTGACAGGAAAGCTGGAAGAGCTGTCAAGAAACGAAGCCAA 1844
||.||.||..||||.||||||||.|||||||||||.|||||.||||||||
RBAM_007020__ 1798 ACCATCGTGTTGACCGGAAAGCTTGAAGAGCTGTCCAGAAATGAAGCCAA 1847
BSNT_01133___ 1845 AGCGCAAATCGAAGCGCTGGGCGGAAAGCTGACTGGAAGCGTCAGCAAAA 1894
.|||||.||.||||||||.||||||||||||||.|||...||||||||||
RBAM_007020__ 1848 GGCGCAGATTGAAGCGCTCGGCGGAAAGCTGACGGGATCTGTCAGCAAAA 1897
BSNT_01133___ 1895 ACACAGACTTAGTCATCGCCGGAGAAGCGGCGGGAAGCAAGCTGACAAAA 1944
|.|||||.||..|.||.||||||||||||||.||||||||||||||||||
RBAM_007020__ 1898 AAACAGATTTGCTGATTGCCGGAGAAGCGGCCGGAAGCAAGCTGACAAAA 1947
BSNT_01133___ 1945 GCACAAGAGCTGAACATTGAAGTGTGGAATGAAGAACAGTTAATGGGAGA 1994
||.||.||..|.||.||||||||.||||||||||.||||.||.|||||||
RBAM_007020__ 1948 GCGCAGGAATTAAATATTGAAGTATGGAATGAAGCACAGCTATTGGGAGA 1997
BSNT_01133___ 1995 GCTAAAGAAATAA 2007
|||||||||||||
RBAM_007020__ 1998 GCTAAAGAAATAA 2010
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