Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00402 and RBAM_002690
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:10
# Commandline: needle
# -asequence dna-align/BSNT_00402___purT.1.9828.seq
# -bsequence dna-align/RBAM_002690___purT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00402___purT-RBAM_002690___purT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00402___purT-RBAM_002690___purT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00402___purT
# 2: RBAM_002690___purT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1176
# Identity: 910/1176 (77.4%)
# Similarity: 910/1176 (77.4%)
# Gaps: 42/1176 ( 3.6%)
# Score: 3519.0
#
#
#=======================================
BSNT_00402___ 1 ATGTATCAATCAAAGAAGGTTTTATTGTTAGGTTCAGGTGAATTAGGTAA 50
||||||||..|.||||||.|.||.||.|||||.|||||.||..|.||.||
RBAM_002690__ 1 ATGTATCAGGCGAAGAAGATGTTGTTATTAGGATCAGGCGAGCTGGGGAA 50
BSNT_00402___ 51 AGAGGTAGTGATTGAAGCCCAGCGTCTTGGGGTACAGACGGTGGCAGTTG 100
|||.||.||.||||||||.|||||.||.|||||....||.||.||.||||
RBAM_002690__ 51 AGAAGTCGTCATTGAAGCGCAGCGGCTCGGGGTTGTCACTGTAGCCGTTG 100
BSNT_00402___ 101 ACAGTTACGAGCATGCTCCGGCAATGCAGGTCGCGCATAACAGTTATGTC 150
||||.||.|||||||||||.||.|||||||.||||||.||.||.|||||.
RBAM_002690__ 101 ACAGCTATGAGCATGCTCCCGCCATGCAGGCCGCGCACAAAAGCTATGTG 150
BSNT_00402___ 151 GTTGATATGCTGGACCCAGAGCAGATCAGAACCATTATTGAGAAAGAAAA 200
.||||||||||.||...||.||||.|||||....|.||||||||||||||
RBAM_002690__ 151 ATTGATATGCTTGATAAAGCGCAGGTCAGAGAAGTCATTGAGAAAGAAAA 200
BSNT_00402___ 201 GCCGGATTTGATTGTGCCTGAGGTGGAGGCGATCGCGACGGATGAATTGC 250
.|||||.|||||.|||||.||.|||||.||.||.|||||||||||..|||
RBAM_002690__ 201 ACCGGACTTGATCGTGCCGGAAGTGGAAGCCATTGCGACGGATGAGCTGC 250
BSNT_00402___ 251 TGAAGCTTGAAGAGGAAGGATTTCACGTCATCCCGAATGCCCGTGCGGCC 300
||||||||||.||.|||||.|||||||||||.||||||||.||||||||.
RBAM_002690__ 251 TGAAGCTTGAGGAAGAAGGTTTTCACGTCATTCCGAATGCGCGTGCGGCA 300
BSNT_00402___ 301 AAGCTGACGATGGATCGGGAAGGCATCAGACGGCTTGCGGCGGAAACGCT 350
||||||||||||||.||.|||||||||||||||||||||||.||.|||||
RBAM_002690__ 301 AAGCTGACGATGGACCGTGAAGGCATCAGACGGCTTGCGGCAGAGACGCT 350
BSNT_00402___ 351 TGGACTTGCGACGGCTGGCTATGAATTTGCGAATACATATGATGAATTTA 400
|...|||.||||.||.|||||||||||.||||||||||||||.|||||||
RBAM_002690__ 351 TCATCTTCCGACTGCCGGCTATGAATTCGCGAATACATATGAAGAATTTA 400
BSNT_00402___ 401 TACAAGCGGCAG-CACAGATCGGTTTTCCTTGTGTCGTTAAACCATTGAT 449
.|.|||||||.| .||| |||||.|||||.||.||.||.|||||..||||
RBAM_002690__ 401 AAGAAGCGGCGGAAACA-ATCGGCTTTCCGTGCGTGGTAAAACCGCTGAT 449
BSNT_00402___ 450 GAGTTCTTCTGGAAAAGGCCAAAGTATCTGCCGCTCTGAAGCGGATT--- 496
|||.|||||.||||||||.|||||..|.||||||| |||.||
RBAM_002690__ 450 GAGCTCTTCCGGAAAAGGGCAAAGCGTGTGCCGCT------CGGCTTCCG 493
BSNT_00402___ 497 ---TAGAGAGCTGCTGGGAGACGGCGATGGAAGGCGGACGGGTGAAAAAC 543
|..|.|||||||||||.|.|||||||||||||||.||||||||||||
RBAM_002690__ 494 GGCTGAAAAGCTGCTGGGACATGGCGATGGAAGGCGGCCGGGTGAAAAAC 543
BSNT_00402___ 544 GGCCGCGTGATCGTTGAGGAGTTTATCCCATTCGAATCAGAAATCACACT 593
|||||.||.|||||||||||.||.||.||.||.||||||||||||||.||
RBAM_002690__ 544 GGCCGGGTCATCGTTGAGGAATTCATTCCGTTTGAATCAGAAATCACTCT 593
BSNT_00402___ 594 CTTAACCGTACGTGCGGTTAACGGTACGGCATTTTGCGAGCCGATCGGTC 643
..|.||.||.||.||||..|||||||||.|.|||||||.|||||||||.|
RBAM_002690__ 594 TCTGACAGTGCGCGCGGCGAACGGTACGTCCTTTTGCGCGCCGATCGGAC 643
BSNT_00402___ 644 ATGTGCAAAAGGACGGGGATTATATCGAATCATGGCAGCCGCATGATATG 693
|||..|||||.|||||.||.|||||.||||||||||||||.|||.|||||
RBAM_002690__ 644 ATGAACAAAAAGACGGTGACTATATTGAATCATGGCAGCCTCATCATATG 693
BSNT_00402___ 694 ACAGAGCAGCAAATAGAAGAAGCGAAGCATATTGCGAAAACGATCACGGA 743
||.||.|||||.||..||||.|||||.||.||||||||||..||.|||||
RBAM_002690__ 694 ACGGAACAGCAGATCAAAGAGGCGAAACACATTGCGAAAAGCATAACGGA 743
BSNT_00402___ 744 TGAGCTTGGGGGATACGGCCTGTTTGGTGTTGAGCTGTTTCTTGCGAAAG 793
.|||||.||.||||||||..||||.||.||.|||||.||.|||.|..|||
RBAM_002690__ 744 CGAGCTCGGCGGATACGGTTTGTTCGGGGTGGAGCTTTTCCTTACTGAAG 793
BSNT_00402___ 794 ATAGGGTATATTTCAGTGAGGTATCTCCCCGTCCGCATGATACGGGTCTT 843
|||..|||||||||||.|||||.||.||||||||||||||||||||.||.
RBAM_002690__ 794 ATAAAGTATATTTCAGCGAGGTGTCCCCCCGTCCGCATGATACGGGGCTC 843
BSNT_00402___ 844 GTCACGCTGGTAACGCAAAATTTGTCAGAATTTGCACTGCATGTCCGGGC 893
||.|||||.||||||||||||||||||||.|||||.|||||||||||.||
RBAM_002690__ 844 GTTACGCTTGTAACGCAAAATTTGTCAGAGTTTGCGCTGCATGTCCGCGC 893
BSNT_00402___ 894 GATTCTCGGCTTTCCGATTACAGAAATCACACAGCTTTCTCCTGGCGCCA 943
|.|..|.||.||.||||||.|.||||||||.|||||.||.||.||.||.|
RBAM_002690__ 894 GGTATTGGGATTCCCGATTCCGGAAATCACTCAGCTGTCGCCGGGGGCAA 943
BSNT_00402___ 944 GCAGGCCCCTCAAAGCGCCGAAAGAATTAGCGGATTACACTGTTGAAGGA 993
||.|.||.||.||.|||||.|||||..|.||.|||||..|.||||||||.
RBAM_002690__ 944 GCCGTCCGCTGAAGGCGCCAAAAGAGCTTGCTGATTATGCGGTTGAAGGT 993
BSNT_00402___ 994 TTGGAAAATGCACTGGCAGTCCCAAAG-ACTCAAGTGCGCGTCTTTGG-A 1041
|||||.||.||..||||.|| ..|||| |||||.||.|||||.||.|| |
RBAM_002690__ 994 TTGGAGAAGGCTTTGGCGGT-AAAAAGCACTCAGGTCCGCGTATTCGGTA 1042
BSNT_00402___ 1042 AAGCCGATAACGAAAACCGGACGTCGGATGGCAGTTGCGCTTTCTGCTGC 1091
||.||| |.||||||...|||||.||.|||||.||||||||||||||.||
RBAM_002690__ 1043 AACCCG-TCACGAAAGTAGGACGCCGTATGGCGGTTGCGCTTTCTGCAGC 1091
BSNT_00402___ 1092 TGATTCAGTTGAAACGGCAAGAGAGAATGCAAAGA-------AAGCGTTG 1134
|||..|.||||||..|||.|||| ||||| ||||
RBAM_002690__ 1092 TGAGACCGTTGAAGAGGCCAGAG-------AAAGAGCGGCCGAAGC---- 1130
BSNT_00402___ 1135 GAC-----CAGCTAACGATAAAATAG 1155
|| ||..||.|.||.|.|||.
RBAM_002690__ 1131 -ACTCAGTCATTTATCAATTACATAA 1155
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