Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00250 and RBAM_001700
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:03
# Commandline: needle
# -asequence dna-align/BSNT_00250___ybxA.1.9828.seq
# -bsequence dna-align/RBAM_001700___cbiO.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00250___ybxA-RBAM_001700___cbiO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00250___ybxA-RBAM_001700___cbiO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00250___ybxA
# 2: RBAM_001700___cbiO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 850
# Identity: 702/850 (82.6%)
# Similarity: 702/850 (82.6%)
# Gaps: 8/850 ( 0.9%)
# Score: 2889.0
#
#
#=======================================
BSNT_00250___ 1 ATGAATCAAAATCAGTTGATATCGGTAGAGGATATCGTATTTCGATATCG 50
.||.|||||||.|||.|.|||||.|||.|.||.||..||||.||.||.||
RBAM_001700__ 1 GTGGATCAAAAACAGCTTATATCCGTAAAAGACATTCTATTCCGCTACCG 50
BSNT_00250___ 51 GAAGGACGCAGAAAGACGAGCACTAGACGGCGTCTCCCTGCAGGTGTATG 100
.||.||.||||||||||..||.||.|||||.||....|||.||||.||.|
RBAM_001700__ 51 CAAAGATGCAGAAAGACCGGCGCTGGACGGTGTGAGTCTGGAGGTATACG 100
BSNT_00250___ 101 AGGGTGAATGGCTTGCAATCGTAGGTCATAACGGTTCAGGGAAATCAACA 150
|.||.|||||||||||.||||||||.||.||||||||||||||.||.||.
RBAM_001700__ 101 AAGGAGAATGGCTTGCTATCGTAGGCCACAACGGTTCAGGGAAGTCGACT 150
BSNT_00250___ 151 CTGGCCCGGGCATTGAATGGTTTAATTCTTCCTGAATCAGGCGACATTGA 200
.|||||.|.||..||||.||..|.|||.|.|||||..|.||.||.|||||
RBAM_001700__ 151 TTGGCCAGAGCGCTGAACGGGCTGATTTTGCCTGAGGCCGGAGAAATTGA 200
BSNT_00250___ 201 GGTTGCCGGGATTCAATTGACAGAGGAATCTGTTTGGGAAGTGCGTAAGA 250
.||.|.|||.||..||.||||.|||||..|.||.|||||.|||||.||.|
RBAM_001700__ 201 AGTCGGCGGCATCAAACTGACTGAGGATACCGTGTGGGATGTGCGAAAAA 250
BSNT_00250___ 251 AGATAGGTATGGTCTTTCAAAATCCGGATAACCAATTTGTCGGAACGACT 300
|.|||||.|||||||||||.|||||.||||||||||||||||||||||||
RBAM_001700__ 251 AAATAGGGATGGTCTTTCAGAATCCCGATAACCAATTTGTCGGAACGACT 300
BSNT_00250___ 301 GTTCGCGATGATGTGGCTTTTGGTTTAGAAAACAATGGTGTACCGCGGGA 350
|||||||||||||||||||||||||||||||||||||||||.|||||.||
RBAM_001700__ 301 GTTCGCGATGATGTGGCTTTTGGTTTAGAAAACAATGGTGTTCCGCGCGA 350
BSNT_00250___ 351 AGAAATGATTGAGAGAGTAGACTGGGCAGTAAAACAGGTTAATATGCAAG 400
|||||||||||||||||||||.|||||.||.|.|||.||.||||||||.|
RBAM_001700__ 351 AGAAATGATTGAGAGAGTAGATTGGGCTGTCACACAAGTCAATATGCAGG 400
BSNT_00250___ 401 ATTTTCTCGATCAAGAGCCGCACCATCTCTCCGGAGGCCAAAAGCAGAGA 450
|||||||.|||||||||||||||||||||||||||||.|||||.||.|||
RBAM_001700__ 401 ATTTTCTTGATCAAGAGCCGCACCATCTCTCCGGAGGTCAAAAACAAAGA 450
BSNT_00250___ 451 GTTGCGATTGCGGGGGTTATTGCCGCACGTCCTGATATTATTATCTTAGA 500
||.|||||.|||||..||||||||||.||||||||||||||.||.||.||
RBAM_001700__ 451 GTGGCGATCGCGGGAATTATTGCCGCGCGTCCTGATATTATGATTTTGGA 500
BSNT_00250___ 501 TGAAGCAACATCCATGCTTGATCCGATCGGGCGAGAAGAAGTGCTTGAAA 550
||||||.||||||||||||||.|||||.|||.||||||||||.|||||.|
RBAM_001700__ 501 TGAAGCGACATCCATGCTTGACCCGATTGGGAGAGAAGAAGTCCTTGATA 550
BSNT_00250___ 551 CGGTAAGACATTTAAAAGAGCAGGGCATGGCGACTGTCATATCCATTACA 600
|.||.||||..||||||||.|||||||||||.||.|||||.||.||.|||
RBAM_001700__ 551 CTGTCAGACGCTTAAAAGATCAGGGCATGGCCACCGTCATTTCGATAACA 600
BSNT_00250___ 601 CATGATCTGGATGAGGCAGCAAAAGCAGACAGGATCATTGTCATGAATGG 650
|||||.|||||.||.||.||||..||.||||||||||||||.|||||.||
RBAM_001700__ 601 CATGACCTGGAAGAAGCCGCAAGGGCGGACAGGATCATTGTGATGAACGG 650
BSNT_00250___ 651 CGGTAAAAAATATGCTGAAGGGC-CGCCTGAAGAGATTTTTAAATTGAAT 699
|||.|..||||||||.| ||||| ||||||||||||||||||||||.||.
RBAM_001700__ 651 CGGCAGGAAATATGCAG-AGGGCACGCCTGAAGAGATTTTTAAATTAAAC 699
BSNT_00250___ 700 AAAGAACTT-GTTCGAATCGGGCTTGATTTACCCTTCTCATTCCAGCTTA 748
.||| |||| |||||.|||||.||||||||.||.||||||||||||||.|
RBAM_001700__ 700 GAAG-ACTTGGTTCGCATCGGTCTTGATTTGCCTTTCTCATTCCAGCTCA 748
BSNT_00250___ 749 GCCAGCTTTTAAGAGAAAATGGACTGGCTTTGGAA--GAAAACCATTTGA 796
|||.||||||.|.|||||..||||||||.|| || .||||||||.|||
RBAM_001700__ 749 GCCTGCTTTTGAAAGAAAGCGGACTGGCGTT--AACGAAAAACCATCTGA 796
BSNT_00250___ 797 CTCAGGAAGGGCTGGTGAAAGAGCTGTGGACATTACAATCAAAGATGTAG 846
|||||||||||||||||||.|||||||||||||||.||||||||||||||
RBAM_001700__ 797 CTCAGGAAGGGCTGGTGAATGAGCTGTGGACATTAAAATCAAAGATGTAG 846
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