Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00224 and RBAM_001440

See Amino acid alignment / Visit BSNT_00224 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:01
# Commandline: needle
#    -asequence dna-align/BSNT_00224___rplB.1.9828.seq
#    -bsequence dna-align/RBAM_001440___rplB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00224___rplB-RBAM_001440___rplB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00224___rplB-RBAM_001440___rplB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00224___rplB
# 2: RBAM_001440___rplB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 834
# Identity:     801/834 (96.0%)
# Similarity:   801/834 (96.0%)
# Gaps:           0/834 ( 0.0%)
# Score: 3873.0
# 
#
#=======================================

BSNT_00224___      1 ATGGCGATTAAAAAGTATAAACCGACCTCTAATGGACGTCGTGGCATGAC     50
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
RBAM_001440__      1 ATGGCGATTAAAAAGTATAAACCGACCTCTAACGGACGTCGTGGCATGAC     50

BSNT_00224___     51 AACTTCAGATTTTGCTGAAATCACGACTGACAAGCCGGAAAAATCCTTGC    100
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
RBAM_001440__     51 AACTTCAGATTTTGCTGAAATCACGACTGACCAGCCGGAAAAATCCTTGC    100

BSNT_00224___    101 TTGCTCCCCTTCACAAAAAAGGCGGACGTAACAACCAAGGTAAATTGACT    150
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
RBAM_001440__    101 TTGCGCCCCTTCACAAAAAAGGCGGACGTAACAACCAAGGTAAATTGACT    150

BSNT_00224___    151 GTACGTCACCAAGGTGGCGGACATAAACGCCAATACCGTGTTATCGACTT    200
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
RBAM_001440__    151 GTACGTCACCAAGGTGGCGGACACAAACGCCAATACCGTGTTATCGACTT    200

BSNT_00224___    201 CAAACGCGATAAAGATGGTATACCTGGACGCGTTGCTACAGTTGAATACG    250
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
RBAM_001440__    201 CAAACGCGATAAAGATGGTATACCTGGACGCGTTGCTACAGTTGAGTACG    250

BSNT_00224___    251 ATCCAAACCGTTCAGCTAACATCGCTCTAATCAACTATGCAGACGGAGAA    300
                     ||||||||||||||||||||||.||.|||||||||||||.||||||||||
RBAM_001440__    251 ATCCAAACCGTTCAGCTAACATTGCACTAATCAACTATGTAGACGGAGAA    300

BSNT_00224___    301 AAACGTTACATTCTTGCTCCTAAAGGAATTCAAGTAGGTACTGAAATCAT    350
                     |||||||||||||||||.||.|||||||||||||||||||||||||||||
RBAM_001440__    301 AAACGTTACATTCTTGCACCAAAAGGAATTCAAGTAGGTACTGAAATCAT    350

BSNT_00224___    351 GTCAGGTCCTGAAGCTGACATTAAAGTAGGTAATGCACTTCCACTTATCA    400
                     |||.||.||||||||||||||.|||||||||||.||||||||.|||||||
RBAM_001440__    351 GTCCGGCCCTGAAGCTGACATCAAAGTAGGTAACGCACTTCCGCTTATCA    400

BSNT_00224___    401 ACATCCCTGTTGGTACAGTTGTGCATAACATTGAATTAAAACCTGGTAAA    450
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
RBAM_001440__    401 ACATTCCTGTTGGTACAGTTGTGCATAACATTGAATTAAAACCTGGTAAA    450

BSNT_00224___    451 GGCGGACAGCTTGTACGTTCAGCTGGTACATCTGCTCAGGTTCTTGGTAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001440__    451 GGCGGACAGCTTGTACGTTCAGCTGGTACATCTGCTCAGGTTCTTGGTAA    500

BSNT_00224___    501 AGAAGGTAAATACGTTCTTGTACGTCTTAACTCTGGTGAAGTTCGCATGA    550
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
RBAM_001440__    501 AGAAGGCAAATACGTTCTTGTACGTCTTAACTCTGGTGAAGTTCGCATGA    550

BSNT_00224___    551 TCCTTTCTGCTTGCCGTGCTTCTATCGGTCAAGTAGGTAACGAACAGCAC    600
                     ||||||||||||||||.||||||||||||||||||||||||||.||||||
RBAM_001440__    551 TCCTTTCTGCTTGCCGCGCTTCTATCGGTCAAGTAGGTAACGAGCAGCAC    600

BSNT_00224___    601 GAACTTATCAACATTGGTAAAGCTGGACGTTCTCGCTGGAAAGGCATCCG    650
                     ||||||||||||.||||||||||.|||||.|||||||||||||||||.||
RBAM_001440__    601 GAACTTATCAACGTTGGTAAAGCAGGACGCTCTCGCTGGAAAGGCATTCG    650

BSNT_00224___    651 TCCTACAGTTCGTGGTTCTGTAATGAACCCTAACGATCACCCACACGGTG    700
                     .||||||||.||.|||||||||||||||||||||||||||||.|||||||
RBAM_001440__    651 CCCTACAGTCCGCGGTTCTGTAATGAACCCTAACGATCACCCGCACGGTG    700

BSNT_00224___    701 GTGGTGAAGGACGTGCGCCAATCGGACGTAAATCACCAATGTCTCCATGG    750
                     ||||||||||.||.||||||||||||||||||||||||||||||||.|||
RBAM_001440__    701 GTGGTGAAGGTCGCGCGCCAATCGGACGTAAATCACCAATGTCTCCTTGG    750

BSNT_00224___    751 GGCAAACCAACTCTTGGATTCAAGACTCGTAAGAAAAAGAACAAATCCGA    800
                     ||||||||.|||||||||||||||||.||||||||||||||||||||.||
RBAM_001440__    751 GGCAAACCGACTCTTGGATTCAAGACACGTAAGAAAAAGAACAAATCTGA    800

BSNT_00224___    801 TAAATTTATCGTACGTCGTCGTAAAAATAAATAA    834
                     ||||||||||||||||||||||||||||||||||
RBAM_001440__    801 TAAATTTATCGTACGTCGTCGTAAAAATAAATAA    834


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