Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00119 and RBAM_000780
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:54
# Commandline: needle
# -asequence dna-align/BSNT_00119___yacA.1.9828.seq
# -bsequence dna-align/RBAM_000780___yacA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00119___yacA-RBAM_000780___yacA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00119___yacA-RBAM_000780___yacA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00119___yacA
# 2: RBAM_000780___yacA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1449
# Identity: 1125/1449 (77.6%)
# Similarity: 1125/1449 (77.6%)
# Gaps: 60/1449 ( 4.1%)
# Score: 4339.5
#
#
#=======================================
BSNT_00119___ 1 GTGAAAAGTGTCAAAGATTTTTTAAACAAACACA--ATCTT---ACGTTA 45
||||||||.||..||||||||||.| |||||.| ||||| .||
RBAM_000780__ 1 GTGAAAAGCGTGGAAGATTTTTTCA--AAACATATCATCTTCAGGCG--- 45
BSNT_00119___ 46 AAAGGG-GCGACAATCATTGTAGGCGTTTCTGGCGGTCCGGACTCAATGG 94
.|||| |..||.||.||||..||.||.||.||.||.||.||.|||||||
RBAM_000780__ 46 -GAGGGAGAAACGATTATTGCCGGGGTCTCCGGAGGCCCTGATTCAATGG 94
BSNT_00119___ 95 CTCTTCTTCACGCGT----TGCATACGTTATGCGGCCGTTCAGCGAATGT 140
|.|||| ||| || ||.|||.|...|.|||.|.|||..|...|.|
RBAM_000780__ 95 CGCTTC-TCA---GTATGCTGAATAAGCACTTCGGGCATTCCTCCGTTAT 140
BSNT_00119___ 141 TATTGCAGCTCACGTTGACCATCGGTTCAGAGGTGCGGAATCCGAGGAGG 190
.||.||.||.||.||.|||||||.||||||.|||.|.|||||.||.||.|
RBAM_000780__ 141 CATAGCGGCGCATGTCGACCATCAGTTCAGGGGTCCTGAATCTGAAGAAG 190
BSNT_00119___ 191 ACATGCGTTTTGTCCAAGCTTATTGTAAAGCTGAACAGCTCGTGTGCGAA 240
|.|||...|||||.||..|.|||||..||||.|||||..||.|.||||||
RBAM_000780__ 191 ATATGAAGTTTGTGCAGTCATATTGCGAAGCGGAACACATCCTCTGCGAA 240
BSNT_00119___ 241 ACGGCTCAAATCAATGTAACCGCATATGCACAG--GAAAAAGGACTCAAT 288
||||..||.||..||||..|.|||||.|||.|| |||.||| ||.||.
RBAM_000780__ 241 ACGGTACAGATTGATGTTTCTGCATACGCAAAGAAGAATAAG--CTGAAC 288
BSNT_00119___ 289 AAGCAGGCTGCAGCACGTGATTGCCGCTACCAGTTTTTTGAAGAAATCAT 338
|||||||||||.||.|||||||||.|.||.||||||||.|||||..|.||
RBAM_000780__ 289 AAGCAGGCTGCCGCGCGTGATTGCAGATATCAGTTTTTCGAAGATCTGAT 338
BSNT_00119___ 339 GTCGAAGCACCAAGCGGACTATCTAGCTCTTGCGCATCATGGTGATGACC 388
|.|.||.|||||||||.|.|.|.|.||.||.||.||||||||.|||||.|
RBAM_000780__ 339 GACAAAACACCAAGCGAAGTTTTTGGCGCTGGCTCATCATGGCGATGATC 388
BSNT_00119___ 389 AGGTTGAAACAATGCTTATGAAACTGGCTAAGGGTACGCTTGGAACGGGA 438
|.|||||.||||||||.||||..||.||.||.||||||||.||..|.||.
RBAM_000780__ 389 AAGTTGAGACAATGCTCATGAGGCTTGCGAAAGGTACGCTCGGGGCAGGG 438
BSNT_00119___ 439 CTTGCGGGAATGCAGCCGGTTAGACG-TTTTGGGACGGGGCGGATCATCA 487
|||||||||||||||||.||..| || .||||...|.||..||.|.||||
RBAM_000780__ 439 CTTGCGGGAATGCAGCCCGTCCG-CGAATTTGCATCCGGCTGGCTGATCA 487
BSNT_00119___ 488 GGCCGTTCTTAACCAT--TACAAAGGAAGAGATCCTTCACTATTGCCGTG 535
||||.|||.| |.|| ..|||||||.||.||||||.|.||.||||||.
RBAM_000780__ 488 GGCCTTTCCT--CTATGCGGCAAAGGATGAAATCCTTGAATACTGCCGTC 535
BSNT_00119___ 536 AAAACGGTTTGAGCTACCGGACGGATGAAAGCAACGCCAAAGATGACTAC 585
||.|.||..|.||||||.|.||||||||.|||||.||.|||||.||.||.
RBAM_000780__ 536 AAGAAGGGCTCAGCTACAGAACGGATGAGAGCAATGCAAAAGACGATTAT 585
BSNT_00119___ 586 ACAAGAAACAGATTCAGAAAAACAGTGCTCCCGTTTTTGAAGCAGGAATC 635
||||||||||||||||||||.||.|||||.||.|||||.||.||.|||||
RBAM_000780__ 586 ACAAGAAACAGATTCAGAAAGACCGTGCTTCCTTTTTTAAAACATGAATC 635
BSNT_00119___ 636 TCCGGATGTGCATAAAAGGTTTCAGAAAGTGAGTGAAGCACTGACGGAAG 685
.||.||.||.|||||||.||||||.||.|||||||||||||||||.||||
RBAM_000780__ 636 ACCTGACGTTCATAAAATGTTTCAAAAGGTGAGTGAAGCACTGACAGAAG 685
BSNT_00119___ 686 ATGAGCAATTCTTACAGTCATTAACGAAAGATGAAATGAATAAAGTAATC 735
|.||.||||.|.|.|||||||||||||||||...|||||||||.||.||.
RBAM_000780__ 686 ACGAACAATACCTGCAGTCATTAACGAAAGAACGAATGAATAAGGTTATT 735
BSNT_00119___ 736 ACAAGCCAGTCTAATACATCAGTTGAAATCAATTCCTCTCAATTGCTTGC 785
||||||.||||..|.|||||.||||||.||||||||||||||||||||||
RBAM_000780__ 736 ACAAGCAAGTCAGACACATCGGTTGAAGTCAATTCCTCTCAATTGCTTGC 785
BSNT_00119___ 786 CCTCCCGATGCCTTTACAAAGAAGAGGAGTTCAACTAATATTAAACTATC 835
|||.|||||.||||||||||||||||||||||||||||||||||||||||
RBAM_000780__ 786 CCTTCCGATACCTTTACAAAGAAGAGGAGTTCAACTAATATTAAACTATC 835
BSNT_00119___ 836 TTTATGAAAACGTTCCATCATCCTTTTCAGCCCATCACATTCAGCAGTTT 885
|||||||||||||||||||.||.|||||.||||..|||||.|||||||||
RBAM_000780__ 836 TTTATGAAAACGTTCCATCGTCGTTTTCCGCCCGCCACATACAGCAGTTT 885
BSNT_00119___ 886 CTCGATTGGGCGGAAAATGGCAGTCCTTCAGGAGTACTGGACTTTCCGAA 935
|||||.||||||||||||||.||..|.||.|||||.||.||.||||||||
RBAM_000780__ 886 CTCGAATGGGCGGAAAATGGAAGCGCCTCGGGAGTGCTTGATTTTCCGAA 935
BSNT_00119___ 936 AGGACTGAAGGTGGTCAAATCATATCAGACATGTTTGTTTACATTTGAAC 985
|||.||.|||||||||||||||||||||||||||||||||||||||||||
RBAM_000780__ 936 AGGGCTCAAGGTGGTCAAATCATATCAGACATGTTTGTTTACATTTGAAC 985
BSNT_00119___ 986 AATGGCAGTGCAAAAATGTTCCCTTTGAATACCAAATTAGC-GGAGCTGC 1034
|||||||.||..||||.|||||||||| ||| |.||||||
RBAM_000780__ 986 AATGGCAATGTGAAAAAGTTCCCTTTG-----------AGCTGCAGCTGC 1024
BSNT_00119___ 1035 ----------TGATGAAACGGCAGTGCTCCCTAATGGATATCTGATAGAG 1074
.|..||.||.||.||.|||||.||.||.|.|.||||||||
RBAM_000780__ 1025 AAGGAGCGAAAGGCGAGACTGCTGTTCTCCCCAACGGCTTTATGATAGAG 1074
BSNT_00119___ 1075 GCAAGGC--ATTATGCGGA--CTCGCCTGAAGAACATGGGAATGCTGTTT 1120
| .||| ||.|.||.|| |||...|.| ||.|||||||||||||||
RBAM_000780__ 1075 G--TGGCCGATCAGGCTGATCCTCATATCA--AAAATGGGAATGCTGTTT 1120
BSNT_00119___ 1121 TTATCACAAGTGAAAAAAAGGTGCGGTTTCCCTTAACAATCCGGACGAGA 1170
||||.|||||...|||.|||||||..|||||.||||||||||||||||||
RBAM_000780__ 1121 TTATGACAAGCAGAAACAAGGTGCAATTTCCTTTAACAATCCGGACGAGA 1170
BSNT_00119___ 1171 AAAGCTGGAGACCGGATCAAACTAAAAGGGATGAACGGCTCAAAAAAGGT 1220
|||...||.||||||||||||||.|||||||||||.|||||.||||||||
RBAM_000780__ 1171 AAAATCGGCGACCGGATCAAACTTAAAGGGATGAATGGCTCGAAAAAGGT 1220
BSNT_00119___ 1221 AAAGGATATATTTATTGATAAGAAACTGCCTCTCCAAGAAAGAGACAACT 1270
.||.|||||||||||||||.|.|||||||||||.|..||..|.|||.|.|
RBAM_000780__ 1221 GAAAGATATATTTATTGATCATAAACTGCCTCTGCGGGATCGGGACGAAT 1270
BSNT_00119___ 1271 GGCCGATTGTGACGGACGCAAGCGGTGAAATTATCTGGATACCTGGCTTG 1320
||||||||||.|||||.||.||||||||||||||||||.|.|||||||||
RBAM_000780__ 1271 GGCCGATTGTAACGGATGCGAGCGGTGAAATTATCTGGCTGCCTGGCTTG 1320
BSNT_00119___ 1321 AAAAAATCAATTTTTGAAGATCTTGTGATTCCAAACAGCGACCGCATTGT 1370
||||||||.||.|||||.||||||||||||.|||||||.|||||||||||
RBAM_000780__ 1321 AAAAAATCCATCTTTGACGATCTTGTGATTTCAAACAGTGACCGCATTGT 1370
BSNT_00119___ 1371 ATTACAATATAGACAGCATGAAAAGTGTAGGGGGCAAGCAAAATCATGA 1419
||||||||||||||||||||||||||||||||||||||||..|.|||||
RBAM_000780__ 1371 ATTACAATATAGACAGCATGAAAAGTGTAGGGGGCAAGCATTAACATGA 1419
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