Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00060 and RBAM_000370
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:49
# Commandline: needle
# -asequence dna-align/BSNT_00060___tmk.1.9828.seq
# -bsequence dna-align/RBAM_000370___tmk.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00060___tmk-RBAM_000370___tmk.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00060___tmk-RBAM_000370___tmk.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00060___tmk
# 2: RBAM_000370___tmk
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 647
# Identity: 478/647 (73.9%)
# Similarity: 478/647 (73.9%)
# Gaps: 16/647 ( 2.5%)
# Score: 1713.0
#
#
#=======================================
BSNT_00060___ 1 ATGAGCGGTTTATTTATTACATTCGAAGGTCCTGAAGGTGCAGGAAAAAC 50
|||||||||||||||||.|||||.||||||||||||||||||||.|||||
RBAM_000370__ 1 ATGAGCGGTTTATTTATAACATTTGAAGGTCCTGAAGGTGCAGGGAAAAC 50
BSNT_00060___ 51 GACTGTTCTGCAGGAGATCAAAAACATACTGACAGCAGAAGGCCTTCAGG 100
||||||.||.|||||.||.|||.|.||.|||.|.|||||.||.||.|.||
RBAM_000370__ 51 GACTGTGCTTCAGGAAATGAAAGAGATTCTGTCGGCAGAGGGGCTCCCGG 100
BSNT_00060___ 101 TTATGGCAACTCGAGAGCCAGGCGGAATAGATATTGCAGAACAAATTCGA 150
|.|..||.||..||||.||.|||||.||.||.|||||||||||.||..||
RBAM_000370__ 101 TGACAGCGACAAGAGAACCGGGCGGCATCGACATTGCAGAACAGATCAGA 150
BSNT_00060___ 151 GAGGTTATTCTGAATGAGAACAACACATTAATGGACCCAAAAACAGAAGC 200
||.||.||..|.|||.|.|||||.|||.|.|||||..|||||||.||.||
RBAM_000370__ 151 GAAGTGATCTTAAATAAAAACAATACACTGATGGATGCAAAAACGGAGGC 200
BSNT_00060___ 201 TCT-CTTATATGCGGCTGCAAGGCGCCAGCATTTAGTTGAAAAAGTAAAA 249
.|| ||| ||.||.||.||.||..|.||||||||||..|||||.||..|.
RBAM_000370__ 201 GCTGCTT-TACGCCGCGGCGAGAAGACAGCATTTAGCCGAAAAGGTGCAG 249
BSNT_00060___ 250 CCTGCTTTAGAACAGGGGTTTATCGTTCTTTGCGACAGATTTATAGACAG 299
|||||.||..||.|.|||...||.||.||.|||||..|.||.||.|||||
RBAM_000370__ 250 CCTGCATTGAAAGAAGGGCGCATTGTGCTGTGCGATCGTTTCATCGACAG 299
BSNT_00060___ 300 TTCTCTTGCGTATCAAGGATATGCAAGAGGACTTGGAATTGATGAGGTTC 349
|||.||.||.||||||||.|||||.|||||.||.||.||||||||.||.|
RBAM_000370__ 300 TTCGCTGGCTTATCAAGGCTATGCGAGAGGGCTCGGCATTGATGAAGTCC 349
BSNT_00060___ 350 TGTCGATTAATGAATTTGCCATTGGAGATATGATGCCCCATGTAACGGTT 399
|.||.||.||..|.|||||.||.||.||||.||||||..||||.||..|.
RBAM_000370__ 350 TTTCTATCAACCAGTTTGCAATCGGCGATACGATGCCTGATGTCACCATC 399
BSNT_00060___ 400 TATTTTTCAATTGATCCGGAAGAAGGACTGAAGCGTATTTACG-CAAACG 448
||||||||.|||||.|||||||||||..||||.||.| ||||| |.||.|
RBAM_000370__ 400 TATTTTTCTATTGAGCCGGAAGAAGGGTTGAAACGGA-TTACGTCGAATG 448
BSNT_00060___ 449 GCTCACGGGAGAAAAACAGGCTCGATTTAGAAAAACTGGACTTTCATACA 498
..|||.|.|||||.||..|.||||||.|.||....|||.|||||||.||.
RBAM_000370__ 449 ATTCAAGAGAGAAGAATCGTCTCGATCTTGAGGCCCTGCACTTTCACACG 498
BSNT_00060___ 499 AAAGTACAAGAAGGTTATCAAGAGCTGATGAAGCGATTTCCGGAAAGATT 548
|||||||..|||||.||.|||.||.|.|||.||||.||||||||||||||
RBAM_000370__ 499 AAAGTACGGGAAGGATACCAAAAGGTCATGCAGCGTTTTCCGGAAAGATT 548
BSNT_00060___ 549 TCATTCAGTTGATGCCGGGCAATCCAAA------GGCCTCGTCGTTCAGG 592
.|||.||.|.||.|| |||.||| |..||||||.||||||
RBAM_000370__ 549 CCATACAATCGACGC------ATCGAAAAAGAAGGAACTCGTCATTCAGG 592
BSNT_00060___ 593 ATGTTCTAAAGGTGATCGATGAAGCGTTGAAAAAAATTCAATTGTGA 639
|.|..||..|.|||||..|||||||.||||||||||||||.||||||
RBAM_000370__ 593 ACGCACTTCAAGTGATAAATGAAGCATTGAAAAAAATTCAGTTGTGA 639
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