Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06277 and BSU40940

See Amino acid alignment / Visit BSNT_06277 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:57
# Commandline: needle
#    -asequence dna-align/BSNT_06277___yyaD.1.22522.seq
#    -bsequence dna-align/BSU40940___yyaD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06277___yyaD-BSU40940___yyaD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06277___yyaD-BSU40940___yyaD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06277___yyaD
# 2: BSU40940___yyaD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1017
# Identity:    1008/1017 (99.1%)
# Similarity:  1008/1017 (99.1%)
# Gaps:           0/1017 ( 0.0%)
# Score: 5004.0
# 
#
#=======================================

BSNT_06277___      1 GTGTTGTGGAGAGCCGGAATGAAGTGGATGCTGCTCATATTAGGGAGCCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40940___yy      1 GTGTTGTGGAGAGCCGGAATGAAGTGGATGCTGCTCATATTAGGGAGCCT     50

BSNT_06277___     51 GATTGGGGCCGGATATGCGAGCGGTCAGGAGATATGGCAGTTTTTTGGGG    100
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU40940___yy     51 GATCGGGGCCGGATATGCGAGCGGTCAGGAGATATGGCAGTTTTTTGGGG    100

BSNT_06277___    101 CGGAAAGCGGACTTGCTATTGTGCTGTTTACAATTATGTTCATTTTCTCG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40940___yy    101 CGGAAAGCGGACTTGCTATTGTGCTGTTTACAATTATGTTCATTTTCTCG    150

BSNT_06277___    151 TCTTATATTGTGATGAAAATCAGTTTTAAAGTTCAATCCACTCATTTTCT    200
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU40940___yy    151 TCTTATATTGTGATGAAAATCAGTTTTAAGGTTCAATCCACTCATTTTCT    200

BSNT_06277___    201 GCCGGTTCTGGAGCATTTAATGGGGCCATGGCTGGCGAAAATTTATGATG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40940___yy    201 GCCGGTTCTGGAGCATTTAATGGGGCCATGGCTGGCGAAAATTTATGATG    250

BSNT_06277___    251 TCCTCATCATTTTTTATTTGTTTTCGACGACTATGGTGATGATTGCCGGA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40940___yy    251 TCCTCATCATTTTTTATTTGTTTTCGACGACTATGGTGATGATTGCCGGA    300

BSNT_06277___    301 GGCGGTGTGACCCTGCAAATGTACAAGCTTCCTTTCTGGTGGGGAATCAC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40940___yy    301 GGCGGTGTGACCCTGCAAATGTACAAGCTTCCTTTCTGGTGGGGAATCAC    350

BSNT_06277___    351 GCTGATTTGTATTGTGACAGTGTGTTTGTTTTTGTGGGATGTGAAAGGAA    400
                     |||||||||.||.|||||||||||.|||||||||||||||||||||||||
BSU40940___yy    351 GCTGATTTGCATCGTGACAGTGTGCTTGTTTTTGTGGGATGTGAAAGGAA    400

BSNT_06277___    401 TATTATCTATAAATAGTATTTTGATTCCTGTGTTAGTAGCGGGGCTTTTA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40940___yy    401 TATTATCTATAAATAGTATTTTGATTCCTGTGTTAGTAGCGGGGCTTTTA    450

BSNT_06277___    451 TATGCGCTGATCTCCTTTCAGAGCACACATCACCATACGTGGACGATTGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40940___yy    451 TATGCGCTGATCTCCTTTCAGAGCACACATCACCATACGTGGACGATTGA    500

BSNT_06277___    501 TTTGTCCCAGCAGTATAACTGGCCTGCGAGCATTACGTTTACCTCTTTAA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40940___yy    501 TTTGTCCCAGCAGTATAACTGGCCTGCGAGCATTACGTTTACCTCTTTAA    550

BSNT_06277___    551 ACATCCTTTCAGTTGTTGCGATTTTATCCTCTGTTGGGAAAGAGATGAAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40940___yy    551 ACATCCTTTCAGTTGTTGCGATTTTATCCTCTGTTGGGAAAGAGATGAAA    600

BSNT_06277___    601 GGGCTCGGAGAAGCAAAAATCGCAAGTGTGGCAAGCGGTCTTATTTTTGG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40940___yy    601 GGGCTCGGAGAAGCAAAAATCGCAAGTGTGGCAAGCGGTCTTATTTTTGG    650

BSNT_06277___    651 CGTGATCTCATTTGTTTATAATGAAACGTTGGTGGAGCTGGCGGGCTCCC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40940___yy    651 CGTGATCTCATTTGTTTATAATGAAACGTTGGTGGAGCTGGCGGGCTCCC    700

BSNT_06277___    701 TTTCTCAGTTTGAAATACCGCTGTTTGCCGTTCTGGAGGGTGCGCCTTAT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40940___yy    701 TTTCTCAGTTTGAAATACCGCTGTTTGCCGTTCTGGAGGGTGCGCCTTAT    750

BSNT_06277___    751 TTCCTTTTTTTATGTATGACGGCGGTGCTGTGCCTGGCGATTTACACGAC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40940___yy    751 TTCCTTTTTTTATGTATGACGGCGGTGCTGTGCCTGGCGATTTACACGAC    800

BSNT_06277___    801 GACGGTAGCAGGTTTGCTGGGGCTGTCCAGCCGGCTGATGGCGTTTATTC    850
                     |||||||||.|||||||||||..|||||||||||||||||||||||||||
BSU40940___yy    801 GACGGTAGCTGGTTTGCTGGGTTTGTCCAGCCGGCTGATGGCGTTTATTC    850

BSNT_06277___    851 ATATGCCTAGATGGATGATTGTGTTGATTTTGTTAGTGTTAATGGTACCT    900
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU40940___yy    851 ATATGCCGAGATGGATGATTGTGTTGATTTTGTTAGTGTTAATGGTACCT    900

BSNT_06277___    901 TTTACTTCTTTCGGATTTTCTGATTTGATCGCGTTCTTGTATCCGATATA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40940___yy    901 TTTACTTCTTTCGGATTTTCTGATTTGATCGCGTTCTTGTATCCGATATA    950

BSNT_06277___    951 TGGGATGCTCAATTTGTATTTGTTAGTTTGTCTGCTCTTATATCCTATTT   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40940___yy    951 TGGGATGCTCAATTTGTATTTGTTAGTTTGTCTGCTCTTATATCCTATTT   1000

BSNT_06277___   1001 TGAGTAAATGGAAATAA   1017
                     |||||||||||||||||
BSU40940___yy   1001 TGAGTAAATGGAAATAA   1017


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_06277 and BSU40940

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
