Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05875 and BSU38410
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:10
# Commandline: needle
# -asequence dna-align/BSNT_05875___sacX.1.22522.seq
# -bsequence dna-align/BSU38410___sacX.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05875___sacX-BSU38410___sacX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05875___sacX-BSU38410___sacX.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05875___sacX
# 2: BSU38410___sacX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1380
# Identity: 1362/1380 (98.7%)
# Similarity: 1362/1380 (98.7%)
# Gaps: 0/1380 ( 0.0%)
# Score: 6738.0
#
#
#=======================================
BSNT_05875___ 1 TTGCAGAAAGAGATTGCAAAAGAATTATTGCTGCTCGCAGGAGGAAAAAA 50
|||||.|||||||||||||||||||||.||||||||||||||||||||||
BSU38410___sa 1 TTGCATAAAGAGATTGCAAAAGAATTACTGCTGCTCGCAGGAGGAAAAAA 50
BSNT_05875___ 51 CAATATTATTAGCATCAGCCATTGTACGACCCGTCTTCGTTTTGATGTAA 100
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU38410___sa 51 CAATATTATCAGCATCAGCCATTGTACGACCCGTCTTCGTTTTGATGTAA 100
BSNT_05875___ 101 AGGACGAGACGAAAATTGATATACATGCCATTGAGAACCTGCAAGGTGTG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38410___sa 101 AGGACGAGACGAAAATTGATATACATGCCATTGAGAACCTGCAAGGTGTG 150
BSNT_05875___ 151 CAGGGCACCTTTTTCCGCTATGGGCTTTTCCAGATTATCTTCGGAACAGG 200
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU38410___sa 151 CAGGGCACCTTTTTCCGCTATGGGCTTTTCCAGATTATCTTCGGAGCAGG 200
BSNT_05875___ 201 CGTCGTCAACAAAATATATAAAGAAGTCGTTCATGAATGGGAGACCGCGC 250
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU38410___sa 201 CGTCGTCAACAAAATATATAAAGAAGTCGTTCATGTATGGGAGACCGCGC 250
BSNT_05875___ 251 CTTCTGAAGAGCCTGTCAACCAGAAAAAAGCCAGCCGGAAGCTGAACCCC 300
|||||||||||||||||.|||||||||||||||||||||||||||||||.
BSU38410___sa 251 CTTCTGAAGAGCCTGTCCACCAGAAAAAAGCCAGCCGGAAGCTGAACCCT 300
BSNT_05875___ 301 GCCGCAGCTTTTGCGAAAACACTATCCGATATTTTTGTGCCGATTATTCC 350
|||||||||||||||||||||||.||||||||||||||||||||||||||
BSU38410___sa 301 GCCGCAGCTTTTGCGAAAACACTGTCCGATATTTTTGTGCCGATTATTCC 350
BSNT_05875___ 351 GGCAATAACAGCAAGCGGCCTGCTCATGGGGCTGATCGGCATGATTAAAG 400
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU38410___sa 351 GGCAATAACAGCAAGCGGCCTGCTCATGGGGCTGATCGGCATGATTAAGG 400
BSNT_05875___ 401 TGTTTCACTGGTTCGCTGCCGGCAGCCCATGGATTAAAATGCTCGACCTC 450
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU38410___sa 401 TGTTTCATTGGTTCGCTGCCGGCAGCCCATGGATTAAAATGCTCGACCTC 450
BSNT_05875___ 451 GTGTCCAGCACAGCCTTTATTTTACTGCCGATTTTAGTTGGCTTCAGTGC 500
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU38410___sa 451 GTGTCCAGCACAGCCTTTATTTTACTGCCGATTTTAGTCGGCTTCAGTGC 500
BSNT_05875___ 501 CGCACGGCAATTTGGCAGCAACCCATACCTAGGGGCAGTGATTGCAGGGC 550
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU38410___sa 501 TGCACGGCAATTTGGCAGCAACCCATACCTAGGGGCAGTGATTGCAGGGC 550
BSNT_05875___ 551 TTTTGACGCATCCTGATCTGCTGGACCCGTCTATGCTCGGCAGCAAAACC 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38410___sa 551 TTTTGACGCATCCTGATCTGCTGGACCCGTCTATGCTCGGCAGCAAAACC 600
BSNT_05875___ 601 CCGTCTTCTTTAGACATATGGGGGCTTCATATCCCAATGATGGGCTATCA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38410___sa 601 CCGTCTTCTTTAGACATATGGGGGCTTCATATCCCAATGATGGGCTATCA 650
BSNT_05875___ 651 GGGTTCCATGATACCGATTCTTCTTTCCGTTTTTGTCATGAGCAAAATTG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38410___sa 651 GGGTTCCATGATACCGATTCTTCTTTCCGTTTTTGTCATGAGCAAAATTG 700
BSNT_05875___ 701 AGAAGCTATTAAAATCGATTGTGCCGAAGTCGCTTGATGTCGTGATCATT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38410___sa 701 AGAAGCTATTAAAATCGATTGTGCCGAAGTCGCTTGATGTCGTGATCATT 750
BSNT_05875___ 751 CCCTTTATTACGGTCATGGTGACAGGATGCCTCGCGCTGATTGTGATGAA 800
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU38410___sa 751 CCCTTTATTACGGTCATGGTGACAGGGTGCCTCGCGCTGATTGTGATGAA 800
BSNT_05875___ 801 TCCCGCCGCGTCCATCATCGGCCAGATCATGACACAATCGATCGTCTATA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38410___sa 801 TCCCGCCGCGTCCATCATCGGCCAGATCATGACACAATCGATCGTCTATA 850
BSNT_05875___ 851 TTTATGATCACGCCGGCATTGCCGCCGGAGCTCTTTTCGGCGGCATCTAC 900
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU38410___sa 851 TTTATGATCACGCCGGCATTGCTGCCGGAGCTCTTTTCGGCGGCATCTAC 900
BSNT_05875___ 901 TCCACCATCGTCCTATCTGGATTGCATCATAGCTTTTATGCAATTGAGGC 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38410___sa 901 TCCACCATCGTCCTATCTGGATTGCATCATAGCTTTTATGCAATTGAGGC 950
BSNT_05875___ 951 AACGCTGCTTGCTAATCCGCATGTCGGTGTCAACTTTTTAGTGCCGATAT 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38410___sa 951 AACGCTGCTTGCTAATCCGCATGTCGGTGTCAACTTTTTAGTGCCGATAT 1000
BSNT_05875___ 1001 GGTCGATGGCGAATGTGGCCCAAGGCGGAGCGGGGCTTGCGGTATTCCTC 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38410___sa 1001 GGTCGATGGCGAATGTGGCCCAAGGCGGAGCGGGGCTTGCGGTATTCCTC 1050
BSNT_05875___ 1051 AAAACGAAACAATCAAGCCTGAAGAAAATTGCGCTCCCCGCTTCTCTGAC 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38410___sa 1051 AAAACGAAACAATCAAGCCTGAAGAAAATTGCGCTCCCCGCTTCTCTGAC 1100
BSNT_05875___ 1101 CGCGTTTTTAGGCATTGTTGAGCCGATTGTATTCGGGGTAAATCTCAAAT 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38410___sa 1101 CGCGTTTTTAGGCATTGTTGAGCCGATTGTATTCGGGGTAAATCTCAAAT 1150
BSNT_05875___ 1151 TGATCCGTCCCTTTATCGGAGCAGCCATCGGCGGTGCTATTGGCGGAGCA 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38410___sa 1151 TGATCCGTCCCTTTATCGGAGCAGCCATCGGCGGTGCTATTGGCGGAGCA 1200
BSNT_05875___ 1201 TACGTGGTTGCGGTACAAGTTGTGGCAAATTCCTACGGGCTGACAGGCAT 1250
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU38410___sa 1201 TACGTGGTTGCGGTACAAGTTGTGGCAAATTCCTACGGACTGACAGGCAT 1250
BSNT_05875___ 1251 TCCGATGATTTCAATTGTGCTGCCGTTTGGCGCCGCGAATTTTGTTCATT 1300
|||||||||||||||.||||||||||||||||||||.|||||||||||||
BSU38410___sa 1251 TCCGATGATTTCAATCGTGCTGCCGTTTGGCGCCGCTAATTTTGTTCATT 1300
BSNT_05875___ 1301 ATATGATCGGTTTTTTGATCGCAGCCGTCTCTGCTTTTATAGCTACATTG 1350
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU38410___sa 1301 ATATGATCGGTTTCTTGATCGCAGCCGTCTCTGCTTTTATAGCTACATTG 1350
BSNT_05875___ 1351 TTTCTCGGGTTTAAAGAAGAGACAGAATAA 1380
||||||||||||||||||||||||||||||
BSU38410___sa 1351 TTTCTCGGGTTTAAAGAAGAGACAGAATAA 1380
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