Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05600 and BSU36680
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:37
# Commandline: needle
# -asequence dna-align/BSNT_05600.1.22522.seq
# -bsequence dna-align/BSU36680___ywmF.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05600-BSU36680___ywmF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05600-BSU36680___ywmF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05600
# 2: BSU36680___ywmF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 639
# Identity: 495/639 (77.5%)
# Similarity: 495/639 (77.5%)
# Gaps: 138/639 (21.6%)
# Score: 2451.0
#
#
#=======================================
BSNT_05600 1 ATGAGACAAAACCATCTGCTGGCAGATGGTTTTTTTATATGCAAAAAAAG 50
BSU36680___yw 0 -------------------------------------------------- 0
BSNT_05600 51 GGGAGCATCGGAACGTTTATTTCCGGGGAGAACAGGAAAAATCGCTACAG 100
BSU36680___yw 0 -------------------------------------------------- 0
BSNT_05600 101 CACTGTTTTTTGAACAAAAGCCGTTTTGGGATGCAGATCTGCACGTGAGG 150
.||||.||||||
BSU36680___yw 1 --------------------------------------ATGCATGTGAGG 12
BSNT_05600 151 GGGAATTCAATGTTTGGTTTTAATGATATGGTGAAGTTTCTGTGGTCTTT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36680___yw 13 GGGAATTCAATGTTTGGTTTTAATGATATGGTGAAGTTTCTGTGGTCTTT 62
BSNT_05600 201 CCTCATTGTTCTGCCGCTTGTACAGATTATACATGTTTCAGGGCACAGCT 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36680___yw 63 CCTCATTGTTCTGCCGCTTGTACAGATTATACATGTTTCAGGGCACAGCT 112
BSNT_05600 251 TTATGGCTTTTATTTTTGGCGGAAAAGGATCGTTGGATATAGGCATGGGA 300
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU36680___yw 113 TTATGGCTTTTATTTTTGGCGGAAAGGGATCGTTGGATATAGGCATGGGA 162
BSNT_05600 301 AAAACGCTGCTTAAAATTGGACCCATACGGTTCAGAACGATTTATTTTAT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36680___yw 163 AAAACGCTGCTTAAAATTGGACCCATACGGTTCAGAACGATTTATTTTAT 212
BSNT_05600 351 CGATTCTTTTTGCCGGTATGGGGAGTTGAAAATTGACAATCGATTCTCAC 400
||||||||||||||||||.||||||||||||||||||||||||||||||.
BSU36680___yw 213 CGATTCTTTTTGCCGGTACGGGGAGTTGAAAATTGACAATCGATTCTCAA 262
BSNT_05600 401 ATGCACTCGTGTATGCAGGGGGCTGCTTGTTTAACCTCATCACGATTTTT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36680___yw 263 ATGCACTCGTGTATGCAGGGGGCTGCTTGTTTAACCTCATCACGATTTTT 312
BSNT_05600 451 GCAATCAATCTGCTGATTATACACAGTGTATTAAAGCCGAATGTGTTTTT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36680___yw 313 GCAATCAATCTGCTGATTATACACAGTGTATTAAAGCCGAATGTGTTTTT 362
BSNT_05600 501 TTATCAGTTTGTCTATTTTTCTACGTATTATGTGTTTTTTGCCCTGCTGC 550
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU36680___yw 363 CTATCAGTTTGTCTATTTTTCTACGTATTATGTGTTTTTTGCCCTGCTGC 412
BSNT_05600 551 CGGTCCGATATTCGGAGAAAAAGTCATCAGACGGGCTGGCGATATACAAG 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36680___yw 413 CGGTCCGATATTCGGAGAAAAAGTCATCAGACGGGCTGGCGATATACAAG 462
BSNT_05600 601 GTGCTCCGTTACGGAGAGCGCTACGAAATCGATAAATAA 639
|||||||||||||||||||||||||||||||||||||||
BSU36680___yw 463 GTGCTCCGTTACGGAGAGCGCTACGAAATCGATAAATAA 501
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