Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04914 and BSU33010
See
Amino acid alignment /
Visit
BSNT_04914 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:23
# Commandline: needle
# -asequence dna-align/BSNT_04914___cssR.1.22522.seq
# -bsequence dna-align/BSU33010___cssR.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04914___cssR-BSU33010___cssR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04914___cssR-BSU33010___cssR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04914___cssR
# 2: BSU33010___cssR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 678
# Identity: 672/678 (99.1%)
# Similarity: 672/678 (99.1%)
# Gaps: 0/678 ( 0.0%)
# Score: 3336.0
#
#
#=======================================
BSNT_04914___ 1 TTGTCATACACCATTTATCTAGTTGAAGATGAGGATAACCTGAATGAACT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33010___cs 1 TTGTCATACACCATTTATCTAGTTGAAGATGAGGATAACCTGAATGAACT 50
BSNT_04914___ 51 GCTGACGAAGTATTTAGAGAATGAGGGCTGGAACATTACATCTTTTACGA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33010___cs 51 GCTGACGAAGTATTTAGAGAATGAGGGCTGGAACATTACATCTTTTACGA 100
BSNT_04914___ 101 AAGGTGAAGACGCCAGAAAGAAAATGACACCGTCTCCCCACCTATGGATT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33010___cs 101 AAGGTGAAGACGCCAGAAAGAAAATGACACCGTCTCCCCACCTATGGATT 150
BSNT_04914___ 151 CTTGATATCATGCTGCCGGATACCGACGGCTATACATTAATAAAAGAAAT 200
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU33010___cs 151 CTCGATATCATGCTGCCGGATACCGACGGCTATACATTAATAAAAGAAAT 200
BSNT_04914___ 201 CAAGGCGAAAGATCCTGACGTGCCGGTCATTTTTATTTCCGCCCGAGATG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33010___cs 201 CAAGGCGAAAGATCCTGACGTGCCGGTCATTTTTATTTCCGCCCGAGATG 250
BSNT_04914___ 251 CGGATATTGACAGAGTGCTTGGCTTAGAGCTTGGCAGCAATGACTACATT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33010___cs 251 CGGATATTGACAGAGTGCTTGGCTTAGAGCTTGGCAGCAATGACTACATT 300
BSNT_04914___ 301 TCAAAGCCGTTTCTGCCGCGGGAGCTGATTATCCGTGTGCAAAAGCTGCT 350
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU33010___cs 301 TCAAAGCCGTTTTTGCCGCGGGAGCTGATTATCCGTGTGCAAAAGCTGCT 350
BSNT_04914___ 351 GCAGCTCGTATATAAGGAAGCTCCTCCTGTCCAAAAAAATGAAATTGCCG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33010___cs 351 GCAGCTCGTATATAAGGAAGCTCCTCCTGTCCAAAAAAATGAAATTGCCG 400
BSNT_04914___ 401 TCTCCTCGTATCGGGTCGCTGAAGACGCCCGCGAGGTCTATGACGAAAAC 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33010___cs 401 TCTCCTCGTATCGGGTCGCTGAAGACGCCCGCGAGGTCTATGACGAAAAC 450
BSNT_04914___ 451 GGGAATATTATCAATTTGACGTCAAAGGAATTTGATCTGCTGCTATTATT 500
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU33010___cs 451 GGGAATATCATCAATTTGACGTCAAAGGAATTTGATCTGCTGCTATTATT 500
BSNT_04914___ 501 TATCCATCATAAAGGGCATCCGTACTCTCGTGAGGATATCCTCCTAAAAG 550
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU33010___cs 501 TATCCATCATAAAGGGCATCCATACTCTCGTGAGGATATCCTCCTAAAAG 550
BSNT_04914___ 551 TGTGGGGGCATGACTACTTCGGAACAGACCGGGTCGTTGATGATCTCGTC 600
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU33010___cs 551 TGTGGGGACATGACTACTTCGGAACAGACCGGGTCGTTGATGATCTCGTC 600
BSNT_04914___ 601 CGGAGACTGCGCAGAAAGATGCCTGAATTGAAGGTGGAGACGATTTACGG 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU33010___cs 601 CGGAGACTGCGCAGAAAGATGCCTGAATTGAAGGTGGAGACGATTTACGG 650
BSNT_04914___ 651 TTTCGGCTACAGGTTGATGTCATCATGA 678
|||||||||||||.||||||||||||||
BSU33010___cs 651 TTTCGGCTACAGGATGATGTCATCATGA 678
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.