Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04433 and BSU30430
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:09
# Commandline: needle
# -asequence dna-align/BSNT_04433___ytrD.1.22522.seq
# -bsequence dna-align/BSU30430___ytrD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04433___ytrD-BSU30430___ytrD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04433___ytrD-BSU30430___ytrD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04433___ytrD
# 2: BSU30430___ytrD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 979
# Identity: 912/979 (93.2%)
# Similarity: 912/979 (93.2%)
# Gaps: 2/979 ( 0.2%)
# Score: 4280.0
#
#
#=======================================
BSNT_04433___ 1 ATGCCGGATTCCGGTCTGCTTTATAAGGAGTGGAAACAAAATAAAGTCGC 50
.|||||||||||||.||||||||.||.||||||...||.|||||||||||
BSU30430___yt 1 TTGCCGGATTCCGGACTGCTTTACAAAGAGTGGCGGCAGAATAAAGTCGC 50
BSNT_04433___ 51 CTTAGTTATCACCATTTTGGTTTTTATACTAGGTAATCCTTTATCGATTT 100
||||||||||||||||||||||||||||.||||||||||.|||||.||||
BSU30430___yt 51 CTTAGTTATCACCATTTTGGTTTTTATATTAGGTAATCCATTATCAATTT 100
BSNT_04433___ 101 TCAATATGTATCTTACCTATCAAGGCTGTGTCACCTCAAAAGAAAATTGG 150
|.|||||||||||.|.||||||||||||||||||...|||||||||||||
BSU30430___yt 101 TAAATATGTATCTCATCTATCAAGGCTGTGTCACTGGAAAAGAAAATTGG 150
BSNT_04433___ 151 GTTGGTCCCTGCGTATTCGGTGTTGATTATTTAAACGGCACATTTATCTC 200
||.||.||||||||||||.|.||||||||||||||..||.||||||||||
BSU30430___yt 151 GTCGGCCCCTGCGTATTCAGCGTTGATTATTTAAATAGCTCATTTATCTC 200
BSNT_04433___ 201 ATTTTTTTGGATTTGGGGAGTCGTTTTGGCGGTCAGCCAGCTTGGGATTG 250
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU30430___yt 201 ATTGTTTTGGATTTGGGGAGTCGTTTTGGCGGTCAGCCAGCTTGGGATTG 250
BSNT_04433___ 251 AACGTAGCAAGAGCTTCTTTGATTTTACATTAAGCCTACCATATACACGA 300
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU30430___yt 251 AACGTAGCAAGAGCTTCTTTGATTTTACATTAAGCCTTCCATATACACGA 300
BSNT_04433___ 301 GGGCAGATATTTCATGCGAAGTTCTTTACCGGCGGAATGGTGATTGTGGT 350
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU30430___yt 301 GGGCAGATATTTCATGCGAAGTTCCTTACCGGCGGAATGGTGATTGTGGT 350
BSNT_04433___ 351 GCCGCAGCTCATAGGTTACGTTTTGTCTGTTTTGCTGATCATGCTTTTGA 400
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU30430___yt 351 GCCGCAGCTCATAGGTTATGTTTTGTCTGTTTTGCTGATCATGCTTTTGA 400
BSNT_04433___ 401 AGCCAGATCAGGCCGTTTATTTTCACAATTACAGCCTTGGG-ATGATCAT 449
|||||||||||||||||||||||||||||||||| |||||| |||||.||
BSU30430___yt 401 AGCCAGATCAGGCCGTTTATTTTCACAATTACAG-CTTGGGAATGATTAT 449
BSNT_04433___ 450 TGTCAGCATGCTGGCTTATTCGCTTGTTATGGCGGGTGGAGCTCTGACAG 499
|||.|||||||||||||||||..|.||||||||.||.||||||.||||||
BSU30430___yt 450 TGTTAGCATGCTGGCTTATTCTTTGGTTATGGCCGGAGGAGCTTTGACAG 499
BSNT_04433___ 500 GCAATATTTTTGCCCAGCTTTTGGTCTCATTTACCGTGGCCATTTCGCCA 549
||||||.|||.||.||||||.|.||||||||||||||||||||||||||.
BSU30430___yt 500 GCAATAGTTTCGCACAGCTTCTAGTCTCATTTACCGTGGCCATTTCGCCG 549
BSNT_04433___ 550 TTTTTGCTCATCAGCCTGCCTGCGATCAACCTCGAGATCCTTATTGGCGG 599
|||||.||||||||||||||||.|||||||||||||||||||.|||||||
BSU30430___yt 550 TTTTTACTCATCAGCCTGCCTGTGATCAACCTCGAGATCCTTTTTGGCGG 599
BSNT_04433___ 600 ATCAATCGATTTTATCCATGGTCCAGTACCCAAATGGGTGCAGTATTTCA 649
||||||.|||||||||||||||||||||||.|||||||||||||||||||
BSU30430___yt 600 ATCAATAGATTTTATCCATGGTCCAGTACCTAAATGGGTGCAGTATTTCA 649
BSNT_04433___ 650 TTCCTATAATTTATGTAGACTCAAAATGGGCTGAGAATTCACCATATTAT 699
||||.|||||||||||||||||.|||||||||||||||||||||||||||
BSU30430___yt 650 TTCCGATAATTTATGTAGACTCGAAATGGGCTGAGAATTCACCATATTAT 699
BSNT_04433___ 700 TTAGTGATTCCGGCTATCATGACTATCATCTTCTACATCATCGGCTATAT 749
|||||.|||||||||||||||||||||||.||.|||||||||||||||||
BSU30430___yt 700 TTAGTCATTCCGGCTATCATGACTATCATTTTTTACATCATCGGCTATAT 749
BSNT_04433___ 750 TAGCTTTGTCAAACTGTCTAATGAAAGAAACGGATATTTCTTCTTATGGA 799
|||||||||.|||.||||||||||||||||||||||||||||||||||||
BSU30430___yt 750 TAGCTTTGTTAAAATGTCTAATGAAAGAAACGGATATTTCTTCTTATGGA 799
BSNT_04433___ 800 AGCCGCTTAACCGCCCGGTGCAGATCATCGTTATTATCATAGGAATCATG 849
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30430___yt 800 AGCCGCTTAACCGCCCGGTGCAGATCATCGTTATTATCATAGGAATCATG 849
BSNT_04433___ 850 GGGTTTGGCTATTTTGGATTTTCTGCCAGCGAGAGCTTTACAGGCTATCT 899
||.||.|||||||||||||||.||||.||||||||||||.|.||.|||||
BSU30430___yt 850 GGCTTCGGCTATTTTGGATTTACTGCAAGCGAGAGCTTTGCCGGTTATCT 899
BSNT_04433___ 900 CATTGGCATGGCTGCCGGCGCGGTAATCGGTTTCTTGATTAGTTATTTTG 949
|||||||||||.|.|.||.|||||||||||||||||||||||||||||||
BSU30430___yt 900 CATTGGCATGGGTACAGGTGCGGTAATCGGTTTCTTGATTAGTTATTTTG 949
BSNT_04433___ 950 CGATTTATAAAAAAATGAAACTTTTGTAA 978
|||||||||||||||||||||||||||||
BSU30430___yt 950 CGATTTATAAAAAAATGAAACTTTTGTAA 978
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