Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04223 and BSU28940
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:41
# Commandline: needle
# -asequence dna-align/BSNT_04223___ysaA.1.22522.seq
# -bsequence dna-align/BSU28940___ysaA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04223___ysaA-BSU28940___ysaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04223___ysaA-BSU28940___ysaA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04223___ysaA
# 2: BSU28940___ysaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 831
# Identity: 770/831 (92.7%)
# Similarity: 770/831 (92.7%)
# Gaps: 48/831 ( 5.8%)
# Score: 3798.0
#
#
#=======================================
BSNT_04223___ 1 ATGAGCCTTTTGGCAGAAAGATTTGAATCTGAAGCAGAGGAGAAGATCAT 50
||
BSU28940___ys 1 ------------------------------------------------AT 2
BSNT_04223___ 51 GAAAGCCGTATTTTTTGATTTAGATGATACACTACTTTGGGACGAAAAAA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28940___ys 3 GAAAGCCGTATTTTTTGATTTAGATGATACACTACTTTGGGACGAAAAAA 52
BSNT_04223___ 101 GCGTCAGAACAACATTTGCAGAAACTTGCTTACAGGCGGAGAAAAAATAT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28940___ys 53 GCGTCAGAACAACATTTGCAGAAACTTGCTTACAGGCGGAGAAAAAATAT 102
BSNT_04223___ 151 GGCCTTGACCCTGAGGAATTCGAAGCAGCTGTTCGCGAAGCAGCGAGAGA 200
|||||||.|||||||||||||||||||||||||||||||||.||||||||
BSU28940___ys 103 GGCCTTGCCCCTGAGGAATTCGAAGCAGCTGTTCGCGAAGCGGCGAGAGA 152
BSNT_04223___ 201 ATTGTACATGTCATATGAGACGTATCCATATACAGTGATGATCGGCATTA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28940___ys 153 ATTGTACATGTCATATGAGACGTATCCATATACAGTGATGATCGGCATTA 202
BSNT_04223___ 251 ACCCGTTTGAAGGACTGTGGTCCAATTTCTCAGAGCCAATCAGTGAAGGT 300
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU28940___ys 203 ACCCGTTTGAAGGACTGTGGTCCAATTTCTCAGAGCCAATCAGTGAAGGC 252
BSNT_04223___ 301 TTTCAAAAGCTGAACAAGATTGTGCCGGAGTACAGAAGAAATGCATGGAC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28940___ys 253 TTTCAAAAGCTGAACAAGATTGTGCCGGAGTACAGAAGAAATGCATGGAC 302
BSNT_04223___ 351 AAACGGACTGAAAGCGCTTGGGATCGATGATCCTGCATATGGCGAATACT 400
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU28940___ys 303 CAACGGACTGAAAGCGCTTGGGATCGATGATCCTGCATATGGCGAATACT 352
BSNT_04223___ 401 TGGGAGAGTTTTTTGCGGCAGAGCGCAGAAAACGCCCGTTTGTATATGAT 450
|||||||||||||||||||||||||||||||.||||||||||||||||||
BSU28940___ys 353 TGGGAGAGTTTTTTGCGGCAGAGCGCAGAAAGCGCCCGTTTGTATATGAT 402
BSNT_04223___ 451 GAAACATTTGCTGTACTCGATCAATTAAAAGGCAAGTATGAATTATTGCT 500
|||||.||||||||||||||||||||||||||||||||||||||||||||
BSU28940___ys 403 GAAACTTTTGCTGTACTCGATCAATTAAAAGGCAAGTATGAATTATTGCT 452
BSNT_04223___ 501 TTTGACAAATGGCGATCCGAGTCTGCAAAAGGAGAAGCTTGCCGGCGTAC 550
||||||||||||||||||.|||||||||||||||||||||||||||||.|
BSU28940___ys 453 TTTGACAAATGGCGATCCTAGTCTGCAAAAGGAGAAGCTTGCCGGCGTGC 502
BSNT_04223___ 551 CTGAGCTTGCTCCTTACTTCAATGAAATCGTCATCTCGGGCGCATTCGGC 600
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU28940___ys 503 CTGAGCTCGCTCCTTACTTCAATGAAATCGTCATCTCGGGCGCATTCGGC 552
BSNT_04223___ 601 AAGGGCAAGCCGGATGTTTCAATTTTTGAACACTGCCTTAAGCTGATGAA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28940___ys 553 AAGGGCAAGCCGGATGTTTCAATTTTTGAACACTGCCTTAAGCTGATGAA 602
BSNT_04223___ 651 TATTGAAAATGACGATGCCATCATGGTCGGCGATAATTTAAATACTGATA 700
|||||||||.|||||||||||||||||||||||||||||.||||||||||
BSU28940___ys 603 TATTGAAAAAGACGATGCCATCATGGTCGGCGATAATTTGAATACTGATA 652
BSNT_04223___ 701 TTTTAGGCGCTTCAAGAGCCGGAATCAAAACCGTTTGGATCAACCGGACG 750
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU28940___ys 653 TTTTAGGCGCTTCAAGAGCCGGAATCAAAACCGTTTGGATCAACCGGACT 702
BSNT_04223___ 751 GATAAGAAAAACGAAACTGACGTAACGCCTGATTACATCATCAGCAGCCT 800
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU28940___ys 703 GATAAGAAAAACGAAACTGACGTAAAGCCTGATTACATCATCAGCAGCCT 752
BSNT_04223___ 801 TCATGATTTGTTTCCTATATTAGAGAAATAA 831
|||||||||||||||||||||||||||||||
BSU28940___ys 753 TCATGATTTGTTTCCTATATTAGAGAAATAA 783
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