Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03996 and BSU27530
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:13
# Commandline: needle
# -asequence dna-align/BSNT_03996___rarA.1.22522.seq
# -bsequence dna-align/BSU27530___yrvN.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03996___rarA-BSU27530___yrvN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03996___rarA-BSU27530___yrvN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03996___rarA
# 2: BSU27530___yrvN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1266
# Identity: 1254/1266 (99.1%)
# Similarity: 1254/1266 (99.1%)
# Gaps: 0/1266 ( 0.0%)
# Score: 6222.0
#
#
#=======================================
BSNT_03996___ 1 ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTAT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr 1 ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTAT 50
BSNT_03996___ 51 CGGCCAGCAGCATCTGGTGGCTGAAGATAAAATTATTGGCAGAATGGTCC 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr 51 CGGCCAGCAGCATCTGGTGGCTGAAGATAAAATTATTGGCAGAATGGTCC 100
BSNT_03996___ 101 AGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr 101 AGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGA 150
BSNT_03996___ 151 AAAACATCAATCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCG 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr 151 AAAACATCAATCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCG 200
BSNT_03996___ 201 AAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAAATCGTAGCTC 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr 201 AAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAAATCGTAGCTC 250
BSNT_03996___ 251 AGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCAC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr 251 AGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCAC 300
BSNT_03996___ 301 AGGCTGGATAAAGGAAAACAGGATTTTCTATTACCCTATTTAGAAAACGG 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr 301 AGGCTGGATAAAGGAAAACAGGATTTTCTATTACCCTATTTAGAAAACGG 350
BSNT_03996___ 351 GATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA 400
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr 351 AATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA 400
BSNT_03996___ 401 ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACA 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr 401 ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACA 450
BSNT_03996___ 451 CCTGATCTGATTAAACAGGCACTGGAACGCGCGCTCCATGATGAGCATCG 500
|||||.|||||||||||||||||||||||.||||||||||||||||||||
BSU27530___yr 451 CCTGAACTGATTAAACAGGCACTGGAACGTGCGCTCCATGATGAGCATCG 500
BSNT_03996___ 501 GGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATT 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr 501 GGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATT 550
BSNT_03996___ 551 TTGCCCACGGATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAG 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr 551 TTGCCCACGGATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAG 600
BSNT_03996___ 601 CTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAATTCACATTAC 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr 601 CTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAATTCACATTAC 650
BSNT_03996___ 651 ATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATA 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr 651 ATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATA 700
BSNT_03996___ 701 AAGATGGTGACGCGCATTATGATGTACTGTCCGCTTTTCAAAAATCGATC 750
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU27530___yr 701 AAGATGGTGACGCGCATTATGATGTACTGTCCGCTTTTCAAAAATCAATC 750
BSNT_03996___ 751 CGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr 751 CGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA 800
BSNT_03996___ 801 AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr 801 AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATG 850
BSNT_03996___ 851 AAGATATCGGTTTAGCAAGCCCGCAAGCCGGCCCTAGAGTGCTGAACGCT 900
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr 851 AGGATATCGGTTTAGCAAGCCCGCAAGCCGGCCCTAGAGTGCTGAACGCT 900
BSNT_03996___ 901 ATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGC 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr 901 ATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGC 950
BSNT_03996___ 951 CAACGCAGTTATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTC 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr 951 CAACGCAGTTATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTC 1000
BSNT_03996___ 1001 TGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAAAATTGGTGAT 1050
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU27530___yr 1001 TGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAAAATTGGGGAT 1050
BSNT_03996___ 1051 GTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGG 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27530___yr 1051 GTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGG 1100
BSNT_03996___ 1101 AAGAGGAATCGACTATAAATACCCGCACAATTACGACAGCGGTTGGGTCG 1150
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU27530___yr 1101 AAGAGGAATCGACTATAAATACCCGCACAATTACGACAACGGTTGGGTCG 1150
BSNT_03996___ 1151 AACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG 1200
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU27530___yr 1151 AACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG 1200
BSNT_03996___ 1201 AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATT 1250
||||||||.|||||.||||||||.|||||||||||||||||.||||||||
BSU27530___yr 1201 AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATT 1250
BSNT_03996___ 1251 AATGAAAAGAAAATAA 1266
||||||||||||||||
BSU27530___yr 1251 AATGAAAAGAAAATAA 1266
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