Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03873 and BSU26640

See Amino acid alignment / Visit BSNT_03873 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:58
# Commandline: needle
#    -asequence dna-align/BSNT_03873___trkA.1.22522.seq
#    -bsequence dna-align/BSU26640___yrdP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03873___trkA-BSU26640___yrdP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03873___trkA-BSU26640___yrdP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03873___trkA
# 2: BSU26640___yrdP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1038
# Identity:    1023/1038 (98.6%)
# Similarity:  1023/1038 (98.6%)
# Gaps:           0/1038 ( 0.0%)
# Score: 5055.0
# 
#
#=======================================

BSNT_03873___      1 GTGTACGACACTATCGTAATCGGGGCTGGTCAAGCAGGGATCTCGATAGG     50
                     ||||||||||||||.|||||||||||||||||||||||||||||.|||||
BSU26640___yr      1 GTGTACGACACTATAGTAATCGGGGCTGGTCAAGCAGGGATCTCAATAGG     50

BSNT_03873___     51 ATATTATTTTAAGCAGTCCGATCAAAAGTTTATCATTTTGGATAAAAGTC    100
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU26640___yr     51 ATATTATCTTAAGCAGTCCGATCAAAAGTTTATCATTTTGGATAAAAGTC    100

BSNT_03873___    101 ATGAGGTGGGGGAGAGCTGGAAAGATCGGTATGACTCATTGGTTTTATTT    150
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU26640___yr    101 ATGAGGTGGGGGAGAGCTGGAAAGATCGGTATGACTCATTAGTTTTATTT    150

BSNT_03873___    151 ACTTCTCGAATGTATAGCTCTTTGCCTGGAATGCATCTTGAAGGAGACAA    200
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU26640___yr    151 ACTTCTCGAATGTATAGCTCTTTGCCTGGAATGCATCTTGAAGGAGAAAA    200

BSNT_03873___    201 ACATGGATTTCCTACAAAAAATGAAATTGTTGCTTATCTAAAGAAATATG    250
                     |||||||||||||.|||||||||||||||||||||||||||||||.||||
BSU26640___yr    201 ACATGGATTTCCTTCAAAAAATGAAATTGTTGCTTATCTAAAGAAGTATG    250

BSNT_03873___    251 TTGAAAAATTTGAAATTCCAATCCAATTACGGACAGAAGTAATAAGTGTC    300
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU26640___yr    251 TTAAAAAATTTGAAATTCCAATCCAATTACGGACAGAAGTAATAAGTGTC    300

BSNT_03873___    301 CTAAAAATAAAGAATTATTTCTTAATAAAAACAAATCGGGAAGAATATCA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26640___yr    301 CTAAAAATAAAGAATTATTTCTTAATAAAAACAAATCGGGAAGAATATCA    350

BSNT_03873___    351 AACGAAGAATCTTGTCATTGCTACAGGGCCTTTTCATACCCCTAATATTC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26640___yr    351 AACGAAGAATCTTGTCATTGCTACAGGGCCTTTTCATACCCCTAATATTC    400

BSNT_03873___    401 CATCAATATCAAAGGATTTATTCGATAATATTAATCAACTACACTCATCA    450
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU26640___yr    401 CATCAATATCAAAGGATTTATCCGATAATATTAATCAACTACACTCATCA    450

BSNT_03873___    451 CAATATAAGAATTCAAAACAATTGGCATATGGAAATGTACTAGTAGTTGG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26640___yr    451 CAATATAAGAATTCAAAACAATTGGCATATGGAAATGTACTAGTAGTTGG    500

BSNT_03873___    501 TGGTGGGAATAGTGGTGCTCAGATAGCTGTTGAATTATCCAAAGAAAGAG    550
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU26640___yr    501 TGGTGGGAATAGTGGTGCTCAAATAGCTGTTGAATTATCCAAAGAAAGAG    550

BSNT_03873___    551 TTACATATTTAGCCTGTAGTAATAAACTAGTTTATTTCCCTTTAATGATC    600
                     |||||||||||||.||||||||||||||.|||||||||||||||||||||
BSU26640___yr    551 TTACATATTTAGCTTGTAGTAATAAACTTGTTTATTTCCCTTTAATGATC    600

BSNT_03873___    601 GGAAAAAGAAGCATCTTTTGGTGGTTTGATAAATTAGGAGTTTTACATGC    650
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU26640___yr    601 GGAAAAAGAAGCATCTTTTGGTGGTTTGATAAACTAGGAGTTTTACATGC    650

BSNT_03873___    651 AAGTCATACATCAATAGTAGGCAAATTCATTCAAAAGAAAGGTGATCCAG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26640___yr    651 AAGTCATACATCAATAGTAGGCAAATTCATTCAAAAGAAAGGTGATCCAG    700

BSNT_03873___    701 TATTTGGGCATGAATTAAAACATGCAATAAAACAGAAGGAGATCATCTTA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26640___yr    701 TATTTGGGCATGAATTAAAACATGCAATAAAACAGAAGGAGATCATCTTA    750

BSNT_03873___    751 AAAAAAAGAGTCATTGCCGCAAAGCAAAATGAAATCATTTTTAAAGATTC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26640___yr    751 AAAAAAAGAGTCATTGCCGCAAAGCAAAATGAAATCATTTTTAAAGATTC    800

BSNT_03873___    801 ATCTACATTAGAAGTAAACAATATTATTTGGGCTACTGGTTTCAGGAATC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26640___yr    801 ATCTACATTAGAAGTAAACAATATTATTTGGGCTACTGGTTTCAGGAATC    850

BSNT_03873___    851 CCTTATGTTGGATAAATATAAAAGGTGTTTTGGATCAAGAAGGTCGAATC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU26640___yr    851 CCTTATGTTGGATAAATATAAAAGGTGTTTTGGATCAAGAAGGTCGAATC    900

BSNT_03873___    901 ATACATCATAGAGGTGTTTCACCTGTAGAAGGATTGTACTTTATAGGGTT    950
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU26640___yr    901 ATACATCATAGAGGTGTTTCACCTGTAGAAGGATTGTACTTTATAGGTTT    950

BSNT_03873___    951 GCCTTGGCAGCATAAGCGAGGTTCAGCATTGCTTCAAGGCGTAGGAAATG   1000
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU26640___yr    951 GCCTTGGCAGCATAAGCGAGGTTCAGCGTTGCTTCAAGGCGTAGGAAATG   1000

BSNT_03873___   1001 ATGCTGAATACATTGTAAAACAAATGAACGGTGAATAA   1038
                     ||||||||||||||||||||||||||||||||||||||
BSU26640___yr   1001 ATGCTGAATACATTGTAAAACAAATGAACGGTGAATAA   1038


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03873 and BSU26640

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
