Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05020 and BSU25860
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:37
# Commandline: needle
# -asequence dna-align/BSNT_05020___yqcG.1.22522.seq
# -bsequence dna-align/BSU25860___yqcG.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05020___yqcG-BSU25860___yqcG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05020___yqcG-BSU25860___yqcG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05020___yqcG
# 2: BSU25860___yqcG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1712
# Identity: 1221/1712 (71.3%)
# Similarity: 1221/1712 (71.3%)
# Gaps: 244/1712 (14.3%)
# Score: 4523.5
#
#
#=======================================
BSNT_05020___ 1 ATGAAAGTATTTGAAGCCAAAACACTGCTTTCCGAAGCTGAAAACCGTGC 50
|||||||||||||||||||||||..||||..||||.||||||||.||.||
BSU25860___yq 1 ATGAAAGTATTTGAAGCCAAAACCTTGCTCACCGAGGCTGAAAAGCGAGC 50
BSNT_05020___ 51 AAAAGAATACAAAGATTTAAAAAGTAAAATGATCAAATTAAAGAAAGCAT 100
|.|.|||||||||||||||||||||||||||.||||||||||||||||.|
BSU25860___yq 51 ACAGGAATACAAAGATTTAAAAAGTAAAATGGTCAAATTAAAGAAAGCGT 100
BSNT_05020___ 101 TCAAAGCTGTCGCTGATTTAGATGATAGTGAATTTTCAGGTAAAGGTGCA 150
||||||||||.||.||||||||||||||.||.||||||||.|||||.||.
BSU25860___yq 101 TCAAAGCTGTTGCAGATTTAGATGATAGCGAGTTTTCAGGCAAAGGCGCT 150
BSNT_05020___ 151 AATAACATCAAATCATTTTATGAAGATCAGGCCGGCATTGCTGACCAGTG 200
||||||||.||||||||||||||||||||.||.||||||||||||||.||
BSU25860___yq 151 AATAACATTAAATCATTTTATGAAGATCAAGCTGGCATTGCTGACCAATG 200
BSNT_05020___ 201 GATTGATCTAATTGAGATGAAAATATCTTTTTTAACGAGTATTCCTGGTA 250
|||||||.||||||||||||||||.|||||.||||||||||||||||||.
BSU25860___yq 201 GATTGATTTAATTGAGATGAAAATTTCTTTCTTAACGAGTATTCCTGGTT 250
BSNT_05020___ 251 TCTTGGAAGACTCCAGCTTATCAGATGCCTACATAGAAGAATCCTTCCTA 300
|.||.|||||..|||.|||||||||||||||||||||||||.||||..||
BSU25860___yq 251 TTTTAGAAGATGCCAACTTATCAGATGCCTACATAGAAGAAACCTTTTTA 300
BSNT_05020___ 301 GAGCATGAGTTGGCCAATGCTAATTCTAAATCAAAATCCATCATGTCAGA 350
|.|||||||.|.||.||.||..|..|.||||||||||||||.|||||.||
BSU25860___yq 301 GCGCATGAGCTTGCTAACGCCTACACCAAATCAAAATCCATTATGTCTGA 350
BSNT_05020___ 351 ACAGAAAAAGGCCATCAAAGACATCTTAAATGAAATACACGATGTCCTTC 400
|||||||||.|||||.|||||.||.||||||||.||..|||||.|.||.|
BSU25860___yq 351 ACAGAAAAAAGCCATGAAAGATATATTAAATGATATCAACGATATACTGC 400
BSNT_05020___ 401 CCTTAGATGTTTTTTCAACGGAAGATTTTAAAACTGAGTTATCTTCTGCT 450
|.||.|||.|.||.||.||.|||..||||||||.|||..|.||.|||||.
BSU25860___yq 401 CTTTGGATCTGTTCTCGACAGAAACTTTTAAAAATGAACTTTCGTCTGCC 450
BSNT_05020___ 451 GAGAAAAAACGAAAA-AATACAGTCGAGAAAATAAGTGAAGTCGATGAGG 499
||.||.||||||||| ||..|| |.||||||||...||||||.||..|..
BSU25860___yq 451 GAAAAGAAACGAAAAGAAGCCA-TTGAGAAAATGGATGAAGTTGACCAAA 499
BSNT_05020___ 500 ACCTAACGTCAGAATACGCCTTGTCAGAAGCAAATGAACAAATGATTCAG 549
||.||||.||||||||||...|.||||||||||||||||||||||||||.
BSU25860___yq 500 ACTTAACATCAGAATACGGACTATCAGAAGCAAATGAACAAATGATTCAA 549
BSNT_05020___ 550 GCTGATTACCAAGCACTCATAAATGCAACAGCAAAAGGCAAGAGTGCCTC 599
||||||||.|||||..|.||.|||||.||||||||||||||.||.|||||
BSU25860___yq 550 GCTGATTATCAAGCTTTAATGAATGCGACAGCAAAAGGCAAAAGCGCCTC 599
BSNT_05020___ 600 TCCTATCCACTATAACGCAAAGGCTTATAGAGACAGTGAAATTCACAAGA 649
||||||.||||||||.||.||||||||||||||||||||.||||||||||
BSU25860___yq 600 TCCTATTCACTATAATGCGAAGGCTTATAGAGACAGTGAGATTCACAAGA 649
BSNT_05020___ 650 TGACTGAGGATGTAAAAAAACAATCGACTGATTATATCGCCTTTAAAGAT 699
||||||||||||||||.||||||||.||.||.||.|||.|.|||||.||.
BSU25860___yq 650 TGACTGAGGATGTAAAGAAACAATCAACAGACTACATCTCTTTTAAGGAC 699
BSNT_05020___ 700 CAGCAGGCCGAACAAAGAAGGCTAGCAAAAGAACAGGAAGAGCTAGCGAA 749
||.|||||.|||||||||||..|.|||||||||||.|||||.||.|||||
BSU25860___yq 700 CAACAGGCGGAACAAAGAAGAATTGCAAAAGAACAAGAAGAACTGGCGAA 749
BSNT_05020___ 750 CAGGCCATGGTACGAAAAGACGTGGGATGTTGTTTGTAATTTTACAGGAG 799
|||.||||||||.||||||.|.|||||||.||||||||||||||||||||
BSU25860___yq 750 CAGACCATGGTATGAAAAGTCTTGGGATGCTGTTTGTAATTTTACAGGAG 799
BSNT_05020___ 800 AAGTCTCTGGATATTATGATTATAAAAGAGCCGCTGATGGAGTTGATCCT 849
|.||||||||||||||||||||||||||||||||||||||.|||||||||
BSU25860___yq 800 AGGTCTCTGGATATTATGATTATAAAAGAGCCGCTGATGGGGTTGATCCT 849
BSNT_05020___ 850 GTTACCGGCGAAAAGTTGACAGAGGGCCAACGTGTAGCAGCTGGAGCGAT 899
|||||||||||||||.|.||.|..||.|||||.||.||.||.||.||.||
BSU25860___yq 850 GTTACCGGCGAAAAGCTAACTGCTGGACAACGGGTCGCTGCCGGTGCAAT 899
BSNT_05020___ 900 GGCTGCGGCAGGTTATGTCCCGATTGTTGGATGGGCTGGAAAATTAGCAA 949
||||||||||||.||..||||.||.||.||||||||.||.||||||||.|
BSU25860___yq 900 GGCTGCGGCAGGATACATCCCTATCGTAGGATGGGCAGGTAAATTAGCTA 949
BSNT_05020___ 950 AAGGCGGAAAAGCTGTTTATTCAACCAGTAAAGCACTCTACACAGCAGAC 999
||||.||||||||||||||||||||.|||||||||.|.||.|.|||||||
BSU25860___yq 950 AAGGTGGAAAAGCTGTTTATTCAACAAGTAAAGCATTGTATAGAGCAGAC 999
BSNT_05020___ 1000 AAAGCACTTGATGTCTACAAAACGCCACAGACATTCCATGCTCTTCAAAA 1049
|||||.||.|||||.||.|||||.||..|||||||||||||.||||||||
BSU25860___yq 1000 AAAGCTCTCGATGTATATAAAACACCTAAGACATTCCATGCCCTTCAAAA 1049
BSNT_05020___ 1050 TTCGAGTAAAGGTCTTTATGGGCTTGCTTCTGCGAACGGTTTTAGCGAAG 1099
.||.||.|||||.||||||||.|||||||||||.||.||||||||.||||
BSU25860___yq 1050 CTCCAGCAAAGGACTTTATGGACTTGCTTCTGCAAATGGTTTTAGTGAAG 1099
BSNT_05020___ 1100 CTATAACAGGCCGCGACATGTTTGGCAATAAGATTTCAAAAGAACAGCAG 1149
||||||||||.|||||.|||||.||.|||||..|.||.|||||...|||
BSU25860___yq 1100 CTATAACAGGACGCGATATGTTCGGGAATAAAGTCTCCAAAGAGAGGCA- 1148
BSNT_05020___ 1150 CATAACAGTATAAATGCAGCACTT-GCTGTTTTCATGCCATTTGGTGCAA 1198
|.||||| ||| ||| | ||||||||
BSU25860___yq 1149 -AGAACAG---------AGC-CTTAG----------------TGGTGCAA 1171
BSNT_05020___ 1199 ----AAGGTT------TTTC--------CGGA------AAAACGGGCCTT 1224
||.||| |||| |||| ||||.| |||
BSU25860___yq 1172 TGGCAATGTTGGTTCCTTTCGGAGCTCGCGGAATTAACAAAAAG---CTT 1218
BSNT_05020___ 1225 AAAGC---------TTC------------ATCATCAACTGAAACC-GTAA 1252
||.|| ||| |.||||.|||.|.||| |.||
BSU25860___yq 1219 AATGCAAAATCAAGTTCTCGAGTTAGCGAAGCATCGACTAACACCAGCAA 1268
BSNT_05020___ 1253 -----CTCAAGTTACAGTTA----GTAGAAAAGGGGC-------TTT--- 1283
||.|||||.| || |||.|||| |.| |||
BSU25860___yq 1269 AAAACCTAAAGTTCC---TAAAACGTACAAAA--GACCAACTTATTTCCG 1313
BSNT_05020___ 1284 TAAAG----AAGCGAAAAGAGATGCCGGTATACCACGTGCTCAA-----C 1324
||||| .||.||.|||...|| ||.|.| |||| || |
BSU25860___yq 1314 TAAAGGCGTTAGAGATAAGGTTTG--GGAAAA-----TGCT-AAGGATTC 1355
BSNT_05020___ 1325 AACCAGAATC----AATCAATCGTGTAGAAATGCGTACTGCTCCTCACGA 1370
|||| |.||| ||..|..|||..|.||| ||.|
BSU25860___yq 1356 AACC-GGATCTGTTAAAGACCCGTTAACAAA---------------ACAA 1389
BSNT_05020___ 1371 AGGCGGTCGTGTAAT---TAAAGAT-AAAAATGGTA----------AAAT 1406
||||| .|||||| ||..||||.| |||.
BSU25860___yq 1390 ----------GTAATGAAAAAAGATGAACCATGGGATATGGGTCATAAAC 1429
BSNT_05020___ 1407 CA--TTAGGACGAGAGAATACACCTTCACTAACAACAAAG-GC----GAA 1449
|| |||.||....||||.|| |.|||||||| || |||
BSU25860___yq 1430 CAGGTTATGAATTTAGAAAAC---------ATCAACAAAGTGCGATGGAA 1470
BSNT_05020___ 1450 AAAATTATTATACAAGATCA-----TAGCGCTGGACATGAAAAAGGTGGT 1494
|.||.|||||..|.|.|.|| || |.||.||||.|.|| |
BSU25860___yq 1471 AGAAATATTAGTCGAAAGCAATTTTTA--GATGAACATAATAA------T 1512
BSNT_05020___ 1495 CAAGGTCCGCACTTTAACGTTAGACC--AATTGATAATACTCGAACAGGA 1542
|.|| ..||||.|.| ||| |||| |...|.|||.||.||||
BSU25860___yq 1513 CCAG---ACCACTATCA------ACCCGAATT-ACCTTCCTCCAATAGGA 1552
BSNT_05020___ 1543 AAAGTCCCTGGCACAA-----AAGA----AC-----ATTATCCTT----- 1573
|.||.|| |||| || |||| |||
BSU25860___yq 1553 ---------GTCATAAAGGGGAAGATATGACGGATGATTA--CTTTGGAG 1591
BSNT_05020___ 1574 -TTAATAAATAA 1584
||||
BSU25860___yq 1592 ATTAA------- 1596
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