Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_03804 and BSU25560

See Amino acid alignment / Visit BSNT_03804 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:53
# Commandline: needle
#    -asequence dna-align/BSNT_03804___holA.1.22522.seq
#    -bsequence dna-align/BSU25560___yqeN.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03804___holA-BSU25560___yqeN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03804___holA-BSU25560___yqeN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03804___holA
# 2: BSU25560___yqeN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1044
# Identity:    1041/1044 (99.7%)
# Similarity:  1041/1044 (99.7%)
# Gaps:           0/1044 ( 0.0%)
# Score: 5193.0
# 
#
#=======================================

BSNT_03804___      1 ATGGTATTTGATGTGTGGAAAAGCCTGAAAAAAGGAGATGTCCATCCAGT     50
                     ||||||||||||||||||||||||||||||||||||||.||||||||.||
BSU25560___yq      1 ATGGTATTTGATGTGTGGAAAAGCCTGAAAAAAGGAGAGGTCCATCCGGT     50

BSNT_03804___     51 TTATTGTTTATACGGAAAAGAGACATATCTGCTGCAAGAAACCGTCAGCA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25560___yq     51 TTATTGTTTATACGGAAAAGAGACATATCTGCTGCAAGAAACCGTCAGCA    100

BSNT_03804___    101 GGATCAGACAGACGGTCGTTGATCAGGAGACAAAGGATTTCAATCTATCC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU25560___yq    101 GGATCAGACAGACGGTCGTTGATCAGGAGACAAAGGATTTCAATCTGTCC    150

BSNT_03804___    151 GTTTTTGATCTGGAAGAGGACCCGCTGGATCAAGCGATTGCAGATGCTGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25560___yq    151 GTTTTTGATCTGGAAGAGGACCCGCTGGATCAAGCGATTGCAGATGCTGA    200

BSNT_03804___    201 AACGTTTCCGTTTATGGGGGAGCGGCGTCTTGTCATTGTGAAAAATCCAT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25560___yq    201 AACGTTTCCGTTTATGGGGGAGCGGCGTCTTGTCATTGTGAAAAATCCAT    250

BSNT_03804___    251 ATTTTTTAACAGGTGAAAAGAAAAAAGAAAAAATTGAGCACAACGTCAGT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25560___yq    251 ATTTTTTAACAGGTGAAAAGAAAAAAGAAAAAATTGAGCACAACGTCAGT    300

BSNT_03804___    301 GCGCTTGAATCATATATACAATCACCTGCGCCTTACACAGTCTTTGTCCT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25560___yq    301 GCGCTTGAATCATATATACAATCACCTGCGCCTTACACAGTCTTTGTCCT    350

BSNT_03804___    351 GCTTGCTCCGTATGAAAAGCTTGATGAGCGAAAAAAGCTGACGAAAGCGT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25560___yq    351 GCTTGCTCCGTATGAAAAGCTTGATGAGCGAAAAAAGCTGACGAAAGCGT    400

BSNT_03804___    401 TAAAGAAGCACGCGTTTATGATGGAGGCGAAGGAATTAAATGCAAAGGAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25560___yq    401 TAAAGAAGCACGCGTTTATGATGGAGGCGAAGGAATTAAATGCAAAGGAA    450

BSNT_03804___    451 ACGACAGACTTTACTGTCAACCTTGCAAAAACAGAGCAGAAAACAATCGG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25560___yq    451 ACGACAGACTTTACTGTCAACCTTGCAAAAACAGAGCAGAAAACAATCGG    500

BSNT_03804___    501 CACGGAAGCGGCGGAGCATTTGGTTCTGCTTGTGAACGGTCATCTGTCAT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25560___yq    501 CACGGAAGCGGCGGAGCATTTGGTTCTGCTTGTGAACGGTCATCTGTCAT    550

BSNT_03804___    551 CGATTTTTCAGGAGATTCAAAAGCTCTGCACGTTTATTGGAGATCGTGAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25560___yq    551 CGATTTTTCAGGAGATTCAAAAGCTCTGCACGTTTATTGGAGATCGTGAA    600

BSNT_03804___    601 GAAATTACGCTGGATGATGTAAAAATGCTTGTTGCTAGAAGCCTTGAACA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25560___yq    601 GAAATTACGCTGGATGATGTAAAAATGCTTGTTGCTAGAAGCCTTGAACA    650

BSNT_03804___    651 AAATATTTTTGAGCTGATCAATAAAATCGTCAACCGAAAACGAACAGAGA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25560___yq    651 AAATATTTTTGAGCTGATCAATAAAATCGTCAACCGAAAACGAACAGAGA    700

BSNT_03804___    701 GTCTGCAAATTTTTTATGATTTGCTAAAACAAAATGAAGAACCGATCAAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25560___yq    701 GTCTGCAAATTTTTTATGATTTGCTAAAACAAAATGAAGAACCGATCAAA    750

BSNT_03804___    751 ATTATGGCGCTTATTTCGAATCAGTTCCGGCTGATTCTGCAGACGAAGTA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25560___yq    751 ATTATGGCGCTTATTTCGAATCAGTTCCGGCTGATTCTGCAGACGAAGTA    800

BSNT_03804___    801 CTTCGCGGAACAGGGATACGGACAAAAACAAATCGCTTCTAATCTAAAAG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25560___yq    801 CTTCGCGGAACAGGGATACGGACAAAAACAAATCGCTTCTAATCTAAAAG    850

BSNT_03804___    851 TTCACCCATTTCGGGTAAAGCTGGCGATGGATCAAGCAAGGCTTTTTTCA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25560___yq    851 TTCACCCATTTCGGGTAAAGCTGGCGATGGATCAAGCAAGGCTTTTTTCA    900

BSNT_03804___    901 GAGGAGGAGCTCCGTTTAATTATTGAACAGCTTGCCGTCATGGACTATGA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25560___yq    901 GAGGAGGAGCTCCGTTTAATTATTGAACAGCTTGCCGTCATGGACTATGA    950

BSNT_03804___    951 GATGAAAACCGGGAAAAAGGACAAGCAGCTCCTGCTCGAACTGTTCCTTT   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25560___yq    951 GATGAAAACCGGGAAAAAGGACAAGCAGCTCCTGCTCGAACTGTTCCTTT   1000

BSNT_03804___   1001 TACAGCTGTTAAAAAGAAATGAAAAAAACGATCCCCATTATTGA   1044
                     ||||||||||||||||||||||||||||||||||||||||||||
BSU25560___yq   1001 TACAGCTGTTAAAAAGAAATGAAAAAAACGATCCCCATTATTGA   1044


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.