Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03778 and BSU25350
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:49
# Commandline: needle
# -asequence dna-align/BSNT_03778___yqfD.1.22522.seq
# -bsequence dna-align/BSU25350___yqfD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03778___yqfD-BSU25350___yqfD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03778___yqfD-BSU25350___yqfD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03778___yqfD
# 2: BSU25350___yqfD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1197
# Identity: 1188/1197 (99.2%)
# Similarity: 1188/1197 (99.2%)
# Gaps: 0/1197 ( 0.0%)
# Score: 5904.0
#
#
#=======================================
BSNT_03778___ 1 GTGAAAAATAAATGGCTGTCTTTTTTTTCGGGTAAGGTCCAGCTTGAATT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25350___yq 1 GTGAAAAATAAATGGCTGTCTTTTTTTTCGGGTAAGGTCCAGCTTGAATT 50
BSNT_03778___ 51 GACGGGAAGAGGGATTGAGCGGCTCCTTAATGAATGCACAAGACAGGGGA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25350___yq 51 GACGGGAAGAGGGATTGAGCGGCTCCTTAATGAATGCACAAGACAGGGGA 100
BSNT_03778___ 101 TTCCGGTCTTTCATGTCAAAAAAAAGAAAGAAGCCGTATCGTTATATATA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25350___yq 101 TTCCGGTCTTTCATGTCAAAAAAAAGAAAGAAGCCGTATCGTTATATATA 150
BSNT_03778___ 151 CAGCTTCAGGATGTACATGCCTTTCGGCGGGTGAGAAGTAAATTTAAATG 200
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU25350___yq 151 CAGCTTCAGGATGTACATGCCTTTCGGCGGGTAAGAAGTAAATTTAAATG 200
BSNT_03778___ 201 TAAAGCCCGATTTATCCATCGGAAGGGTTTTCCCTTCCTGTTGCTGAAAT 250
||||||||||||||||.||||||||||.||||||||||||||||||||||
BSU25350___yq 201 TAAAGCCCGATTTATCAATCGGAAGGGATTTCCCTTCCTGTTGCTGAAAT 250
BSNT_03778___ 251 CAAAGCTGAATATAGGGTTTACGATCGGTTTTGCGATTTTTTTCATCCTT 300
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU25350___yq 251 CAAAGCTGAATATAGGGTTTACGATCGGTTTTGCGATTTTTTTCATTCTT 300
BSNT_03778___ 301 TTGTTTTTGCTGTCCAATATGGTGTGGAAAATTGATGTGACAGGCGCTAA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25350___yq 301 TTGTTTTTGCTGTCCAATATGGTGTGGAAAATTGATGTGACAGGCGCTAA 350
BSNT_03778___ 351 GCCTGAAACAGAACATCAAATGAGGCAGCATCTTAATGAAATCGGCGTCA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25350___yq 351 GCCTGAAACAGAACATCAAATGAGGCAGCATCTTAATGAAATCGGCGTCA 400
BSNT_03778___ 401 AAAAGGGCCGTCTGCAGTTTTTAATGATGTCGCCCGAAAAAATACAGAAA 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25350___yq 401 AAAAGGGCCGTCTGCAGTTTTTAATGATGTCGCCCGAAAAAATACAGAAA 450
BSNT_03778___ 451 TCATTAACCAATGGAATAGACAATATCACTTGGGTCGGAGTTGATCTGAA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25350___yq 451 TCATTAACCAATGGAATAGACAATATCACTTGGGTCGGAGTTGATCTGAA 500
BSNT_03778___ 501 GGGGACGACCATTCACATGAAAGTTGTGGAGAAAAATGAGCCCGAAAAAG 550
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU25350___yq 501 GGGGACGACCATTCATATGAAAGTTGTGGAGAAAAATGAGCCCGAAAAAG 550
BSNT_03778___ 551 AAAAGTATGTTAGCCCGCGCAATATTGTCGCCAAAAAGAAAGCAACCATT 600
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU25350___yq 551 AAAAATATGTTAGCCCGCGCAATATTGTCGCCAAAAAGAAAGCAACCATT 600
BSNT_03778___ 601 ACGAGAATGTTTGTGCAAAAAGGACAGCCCATGGCCGCCATACACGATCA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25350___yq 601 ACGAGAATGTTTGTGCAAAAAGGACAGCCCATGGCCGCCATACACGATCA 650
BSNT_03778___ 651 TGTTGAAAAGGGGCAGCTGCTTGTTTCGGGACTGATCGGCAGCGAAGACC 700
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU25350___yq 651 TGTTGAAAAGGGACAGCTGCTTGTTTCGGGACTGATCGGCAGCGAAGACC 700
BSNT_03778___ 701 ATCAGCAGGAAGTCGCCTCAAAAGCAGAAATTTACGGAGAAACCTGGTAT 750
||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU25350___yq 701 ATCAGCAGGAAGTCGCCTCAAAAGCAGAAATTTATGGAGAAACCTGGTAT 750
BSNT_03778___ 751 AGATCAGAAGTGACAGTCCCGCTTGAAACATTATTTAACGTCTATACGGG 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25350___yq 751 AGATCAGAAGTGACAGTCCCGCTTGAAACATTATTTAACGTCTATACGGG 800
BSNT_03778___ 801 CAAAGTAAGGACAAAGCACAAGCTTTCTTTTGGTTCTTTGGCAATCCCGA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25350___yq 801 CAAAGTAAGGACAAAGCACAAGCTTTCTTTTGGTTCTTTGGCAATCCCGA 850
BSNT_03778___ 851 TCTGGGGGATGACGTTTAAAAAAGAGGAATTGAAGCATCCAAAAACAGAA 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25350___yq 851 TCTGGGGGATGACGTTTAAAAAAGAGGAATTGAAGCATCCAAAAACAGAA 900
BSNT_03778___ 901 CAAGAAAAGCATTCGCTTCATTTTCTCGGATTTAAGCTCCCTGTATCCTA 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25350___yq 901 CAAGAAAAGCATTCGCTTCATTTTCTCGGATTTAAGCTCCCTGTATCCTA 950
BSNT_03778___ 951 TGTCAAAGAGCAAACGAGAGAAAGTGAAGAGGCTTTGCGAAAATATACGA 1000
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU25350___yq 951 TGTCAAAGAGCAAACGAGAGAAAGTGAAGAGGCTTTGCGAAAATATACAA 1000
BSNT_03778___ 1001 AAGAAGAAGCAGTTCAAGAAGGCATTAAATTGGGTAAACAGGATGTAGAG 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25350___yq 1001 AAGAAGAAGCAGTTCAAGAAGGCATTAAATTGGGTAAACAGGATGTAGAG 1050
BSNT_03778___ 1051 GATAAAATAGGCGAAAACGGCGAGGTGAAAAGTGAAAAAGTTTTGCACCA 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25350___yq 1051 GATAAAATAGGCGAAAACGGCGAGGTGAAAAGTGAAAAAGTTTTGCACCA 1100
BSNT_03778___ 1101 GACTGTTGAGAATGGTAAAGTAAAGTTGATTATTCTCTACCAAGTTATAG 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU25350___yq 1101 GACTGTTGAGAATGGTAAAGTAAAGTTGATTATTCTCTACCAAGTTATAG 1150
BSNT_03778___ 1151 AAGATATCGTTCAAACCACACCTATTGTCAGGGAGACTGAAGAATGA 1197
|||||||||||||||||||||||||||||||||||||||||||||||
BSU25350___yq 1151 AAGATATCGTTCAAACCACACCTATTGTCAGGGAGACTGAAGAATGA 1197
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