Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03558 and BSU23920
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:25
# Commandline: needle
# -asequence dna-align/BSNT_03558.1.22522.seq
# -bsequence dna-align/BSU23920___yqjD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03558-BSU23920___yqjD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03558-BSU23920___yqjD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03558
# 2: BSU23920___yqjD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1524
# Identity: 1112/1524 (73.0%)
# Similarity: 1112/1524 (73.0%)
# Gaps: 399/1524 (26.2%)
# Score: 5508.0
#
#
#=======================================
BSNT_03558 0 -------------------------------------------------- 0
BSU23920___yq 1 ATGAATGAGCACATGGATCATTTTTACACGAAACGCAAGCAGGCAGAAGA 50
BSNT_03558 0 -------------------------------------------------- 0
BSU23920___yq 51 AGGCGGAGGACGGGAAAAGCTGGCTCAGCAGCGGCAAAAGGGCAAGCTCA 100
BSNT_03558 0 -------------------------------------------------- 0
BSU23920___yq 101 CTGCTCGGGAAAGGATCATATTTCTTCTAGATCAGGACAGCTTTATCGAA 150
BSNT_03558 0 -------------------------------------------------- 0
BSU23920___yq 151 TTACACCCCTTCATGGAAAGTCAAGTGTTAACAAGAGAACAGCGCATGTT 200
BSNT_03558 0 -------------------------------------------------- 0
BSU23920___yq 201 AGGGGATGGGGTCGTGACAGGGTACGGCACAATTGACGGTCGCTCAGTTT 250
BSNT_03558 0 -------------------------------------------------- 0
BSU23920___yq 251 ATGTATTTGCGCAAGACTTCACAGTGTACGGAGGGGCGCTTGGCGAAACC 300
BSNT_03558 0 -------------------------------------------------- 0
BSU23920___yq 301 CATGCCAGGAAAATCTGCGCTTTGATGGATCTGGCAGCAAAAAATAAGGC 350
BSNT_03558 1 -------------------------------------------------G 1
|
BSU23920___yq 351 GCCGATTATCGGGCTGAATGACTCAGGTGGTGCGAGAATTCAAGAGGGTG 400
BSNT_03558 2 TGGTATCATTAGATGGATACGGTCACATATTTTACCGAAACGTCTTATAT 51
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq 401 TGTTATCATTAGATGGATACGGTCACATATTTTACCGAAACGTCTTATAT 450
BSNT_03558 52 TCCGGAGTCATTCCGCAAATATCGGTTATTTTAGGGCCGTGCGCTGGAGG 101
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq 451 TCCGGAGTCATTCCGCAAATATCGGTTATTTTAGGGCCGTGCGCTGGAGG 500
BSNT_03558 102 CGCTGTATATTCTCCGGCACTCACAGATTTTATATTTATGGCTGAACAGA 151
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq 501 CGCTGTATATTCTCCGGCACTCACAGATTTTATATTTATGGCTGAACAGA 550
BSNT_03558 152 CCGGCCGGATGTTTATTACCGGCCCGAAGGTGATTGAAAAAGTGACAGGG 201
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq 551 CTGGCCGGATGTTTATTACCGGCCCGAAGGTGATTGAAAAAGTGACAGGG 600
BSNT_03558 202 GAACAGGTTGATGCGGAGAGCTTAGGCGGAGCGGGGATACATAATGCCGT 251
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq 601 GAACAGGTTGATGCGGAGAGCTTAGGCGGAGCGGGGATACATAATGCCGT 650
BSNT_03558 252 CAGCGGAAACGCGCACTTTTCCGGACATACGGAGAAGGAGGTTCTGACAG 301
||||||||||||.|||||||||||.|||||||||||||||||||||||||
BSU23920___yq 651 CAGCGGAAACGCCCACTTTTCCGGGCATACGGAGAAGGAGGTTCTGACAG 700
BSNT_03558 302 GGGTGAGAAAACTGCTGTCTTATTTGCCGCTGAATGGCCGGACAACAGAG 351
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU23920___yq 701 GGGTGAGAAAACTACTGTCTTATTTGCCGCTGAATGGCCGGACAACAGAG 750
BSNT_03558 352 CCGAAGCCAGAGAAAGAGGCGTCCAGACCGTTATTAAACCGTCTTGTCCC 401
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq 751 CCGAAGCCAGAGAAAGAGGCGTCCAGACCGTTATTAAACCGTCTTGTCCC 800
BSNT_03558 402 TGCTGATACGACAAAGCCTTATGATGTTCGGAAGGTGATCAGGGAGCTGG 451
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU23920___yq 801 TGCTGATACGACAAAGCCTTATGATGTTCGGAAGGTGATTAGGGAGCTGG 850
BSNT_03558 452 CCGACCCGCAGACTTTTTTTGAGCTTCAGCCATTTTTTGCGAAGAACATT 501
|.|||||||||.|||||||||||.||||||||||||||||||||||||||
BSU23920___yq 851 CTGACCCGCAGTCTTTTTTTGAGATTCAGCCATTTTTTGCGAAGAACATT 900
BSNT_03558 502 GTCATTGGGTTTGCAAGGCTGGGTGAAAAAGCAATCGGCATCGTGGCGAG 551
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq 901 GTCATTGGGTTTGCAAGGCTGGGTGAAAAAGCAATCGGCATCGTGGCGAG 950
BSNT_03558 552 CCAGCCGAAGCATCTGGCGGGAAGCCTGACGATTGACGCTGCTGATAAAG 601
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq 951 CCAGCCGAAGCATCTGGCGGGAAGCCTGACGATTGACGCTGCTGATAAAG 1000
BSNT_03558 602 CAGCAAGGTTCATCCGTTTTTGTGACGCATTTGATATCCCGTTGTTGACT 651
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU23920___yq 1001 CAGCAAGGTTCATCCGTTTTTGTGACGCATTTGATATCCCGCTGTTGACT 1050
BSNT_03558 652 GTCGAAGATGTCCCGGGGTTTCTGCCGGGTATTCAGCAAGAGCACAACGG 701
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq 1051 GTCGAAGATGTCCCGGGGTTTCTGCCGGGTATTCAGCAAGAGCACAACGG 1100
BSNT_03558 702 AATCATCAGGCATGGAGCAAAATTATTGTTTGCTTATGCTGAAGCGACTG 751
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq 1101 AATCATCAGGCATGGAGCAAAATTATTGTTTGCTTATGCTGAAGCGACTG 1150
BSNT_03558 752 TCCCAAAAGTCACACTCATCATTAGAAAAGCGTACGGCGGCGCCTATGTG 801
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq 1151 TCCCAAAAGTCACACTCATCATTAGAAAAGCGTACGGCGGCGCCTATGTG 1200
BSNT_03558 802 GCCATGAACAGCAAAGCGATCGGAGCGGACCTTGTGTTTGCATGGCCGAA 851
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq 1201 GCCATGAACAGCAAAGCGATCGGAGCGGACCTTGTGTTTGCATGGCCGAA 1250
BSNT_03558 852 TGCTGAAATCGCAGTGATGGGTCCAGAAGGTGCGGCATCGATTTTGTATG 901
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq 1251 TGCTGAAATCGCAGTGATGGGTCCAGAAGGTGCGGCATCGATTTTGTATG 1300
BSNT_03558 902 AAAAGGAAATCAAAGCTTCAGCTGACCCGCAAAAGACGAAACGCGAAAAA 951
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq 1301 AAAAGGAAATCAAAGCTTCAGCTGACCCGCAAAAGACGAAACGCGAAAAA 1350
BSNT_03558 952 ACAGCTGAATACAAAAAGCAAAACGCCGGCCCATACAAAGCGGCCGCTTG 1001
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU23920___yq 1351 ACTGCTGAATACAAAAAGCAAAACGCCGGCCCATACAAAGCGGCCGCTTG 1400
BSNT_03558 1002 TGGAATGGTCGATGACATCATTTTGCCGGAAGAATCAAGGGGAAAACTGA 1051
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU23920___yq 1401 TGGAATGGTCGATGACATCATTTTGCCGGAAGAATCAAGGGGAAGACTGA 1450
BSNT_03558 1052 TTCAAGCTTTTCATATGCTTGCACATAAGACAGAAGAGAGACCGAAAAAA 1101
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU23920___yq 1451 TTCAAGCTTTTCATATGCTTACACATAAGACAGAAGAGAGACCGAAAAAA 1500
BSNT_03558 1102 AAGCACGGTAACATACCGCTTTAA 1125
||||||||||||||||||||||||
BSU23920___yq 1501 AAGCACGGTAACATACCGCTTTAA 1524
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