Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03477 and BSU23370

See Amino acid alignment / Visit BSNT_03477 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:15
# Commandline: needle
#    -asequence dna-align/BSNT_03477___ypuA.1.22522.seq
#    -bsequence dna-align/BSU23370___ypuA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03477___ypuA-BSU23370___ypuA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03477___ypuA-BSU23370___ypuA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03477___ypuA
# 2: BSU23370___ypuA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 873
# Identity:     863/873 (98.9%)
# Similarity:   863/873 (98.9%)
# Gaps:           0/873 ( 0.0%)
# Score: 4275.0
# 
#
#=======================================

BSNT_03477___      1 TTGAAGAAAATTTGGATTGGAATGCTGGCAGCGGCCGTTTTGCTGCTGAC     50
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU23370___yp      1 TTGAAGAAAATTTGGATTGGAATGCTGGCAGCGGCCGTTTTGCTGCTGAT     50

BSNT_03477___     51 GGTTCCGAAGGTCAGTCTCGCGGATGCCGCAGTTGGAGATGTCATTGTAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23370___yp     51 GGTTCCGAAGGTCAGTCTCGCGGATGCCGCAGTTGGAGATGTCATTGTAA    100

BSNT_03477___    101 CACTAGGTGCTGATTTGTCAGAATCCGACAAACAAAAAGTGCTTGATGAA    150
                     ||||.||||||||||||||||||||.||||||||||||||||||||||||
BSU23370___yp    101 CACTGGGTGCTGATTTGTCAGAATCTGACAAACAAAAAGTGCTTGATGAA    150

BSNT_03477___    151 ATGAATGTCCCTGATAATGCCACAACGGTAACCGTGACCAATAAGGAAGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23370___yp    151 ATGAATGTCCCTGATAATGCCACAACGGTAACCGTGACCAATAAGGAAGA    200

BSNT_03477___    201 ACATGAATATTTAGGAAAATATATATCAAACGCGCAAATCGGATCGAGAG    250
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU23370___yp    201 ACATGAATATTTAGGAAAATATATATCGAACGCGCAAATCGGATCGAGAG    250

BSNT_03477___    251 CGATTTCTTCATCGTCAATCACCATTGCCAAAAAAGGCTCCGGATTGAAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23370___yp    251 CGATTTCTTCATCGTCAATCACCATTGCCAAAAAAGGCTCCGGATTGAAT    300

BSNT_03477___    301 GTTGAGACCCATAATATCAGCGGCATCACGGATGAAATGTACCTGAATGC    350
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU23370___yp    301 GTTGAGACCCATAATATCAGCGGCATCACAGATGAAATGTACCTGAATGC    350

BSNT_03477___    351 ACTGATGACAGCCGGTGTGAAAGATGCGAAGGTGTATGTTACAGCACCGT    400
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU23370___yp    351 ACTGATGACAGCCGGTGTTAAAGATGCGAAGGTGTATGTTACAGCACCGT    400

BSNT_03477___    401 TTGAAGTATCCGGGACTGCGGCTTTAACTGGATTGATTAAGGCGTATGAA    450
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU23370___yp    401 TTGAAGTATCCGGGACTGCCGCTTTAACTGGATTGATTAAGGCGTATGAA    450

BSNT_03477___    451 GTTTCTTCTGACGAAGCGATCTCGGAGGATGTTAAGCAGGTCGCCAACCA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23370___yp    451 GTTTCTTCTGACGAAGCGATCTCGGAGGATGTTAAGCAGGTCGCCAACCA    500

BSNT_03477___    501 AGAGCTTGTCACGACATCAGAGCTTGGAGACAAAATCGGTAACGAAAATG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23370___yp    501 AGAGCTTGTCACGACATCAGAGCTTGGAGACAAAATCGGTAACGAAAATG    550

BSNT_03477___    551 CGGCAGCCCTGATTGCAAAAATCAAAGAAGAGTTTGCTAAAAACGGGGTG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23370___yp    551 CGGCAGCCCTGATTGCAAAAATCAAAGAAGAGTTTGCTAAAAACGGGGTG    600

BSNT_03477___    601 CCTGATAATAAAGCTGACATCGAAAAACAAGTGGACGACGCAGCTTCTGA    650
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU23370___yp    601 CCTGATAATAAAGCTGACATCGAAAAACAAGTGGATGACGCAGCTTCTGA    650

BSNT_03477___    651 TTTAAACGTCACACTTACTGACAGCCAAAAGAACCAGCTTGTCTCCCTAT    700
                     ||||||||||||||||||.||||||||||||||.||||||||||||||||
BSU23370___yp    651 TTTAAACGTCACACTTACAGACAGCCAAAAGAATCAGCTTGTCTCCCTAT    700

BSNT_03477___    701 TCAATAAGATGAAAAACGCTGACATTGACTGGGGACAGGTCAGTGACCAG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23370___yp    701 TCAATAAGATGAAAAACGCTGACATTGACTGGGGACAGGTCAGTGACCAG    750

BSNT_03477___    751 CTAGATAAAGCGAAAGATAAGATTACGAAATTCATAGAATCAGATGAAGG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23370___yp    751 CTAGATAAAGCGAAAGATAAGATTACGAAATTCATAGAATCAGATGAAGG    800

BSNT_03477___    801 CAAAAACTTCATCCAGAAAGTCATTGATTTCTTCGTATCTATCTGGAATG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU23370___yp    801 CAAAAACTTCATCCAGAAAGTCATTGATTTCTTCGTATCTATCTGGAATG    850

BSNT_03477___    851 CGATTGTATCTATATTCAAATAA    873
                     |||||||||||||||||||||||
BSU23370___yp    851 CGATTGTATCTATATTCAAATAA    873


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03477 and BSU23370

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
