Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_03257 and BSU21860

See Amino acid alignment / Visit BSNT_03257 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:49
# Commandline: needle
#    -asequence dna-align/BSNT_03257___yphP.1.22522.seq
#    -bsequence dna-align/BSU21860___yphP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03257___yphP-BSU21860___yphP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03257___yphP-BSU21860___yphP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03257___yphP
# 2: BSU21860___yphP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 435
# Identity:     431/435 (99.1%)
# Similarity:   431/435 (99.1%)
# Gaps:           0/435 ( 0.0%)
# Score: 2139.0
# 
#
#=======================================

BSNT_03257___      1 ATGTCAATGGCTTATGAAGAATACATGCGCCAGCTTGTCGTACCGATGCG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21860___yp      1 ATGTCAATGGCTTATGAAGAATACATGCGCCAGCTTGTCGTACCGATGCG     50

BSNT_03257___     51 CCGCGAGCTGACTGGAGCAGGTTTTGAAGAGTTAACAACAGCGGAAGAAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21860___yp     51 CCGCGAGCTGACTGGAGCAGGTTTTGAAGAGTTAACAACAGCGGAAGAAG    100

BSNT_03257___    101 TAGAAAACTTTATGGAAAAGGCAGAGGGCACAACTCTTGTAGTCGTTAAC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21860___yp    101 TAGAAAACTTTATGGAAAAGGCAGAGGGCACAACTCTTGTAGTCGTTAAC    150

BSNT_03257___    151 TCTGTATGCGGCTGTGCGGCAGGCCTTGCGCGTCCTGCGGCTACACAGGC    200
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU21860___yp    151 TCTGTATGCGGCTGCGCGGCAGGCCTTGCGCGTCCTGCGGCTACACAGGC    200

BSNT_03257___    201 AGTCCTCCAGAATGACAAAACACCTGACAATACGGTGACTGTTTTTGCGG    250
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU21860___yp    201 AGTCCTCCAGAATGACAAAACACCTGACAATACGGTGACTGTATTTGCGG    250

BSNT_03257___    251 GCCAAGATAAAGAAGCTACTGCGAAAATGCGTGAGTATTTTACTGGCCAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21860___yp    251 GCCAAGATAAAGAAGCTACTGCGAAAATGCGTGAGTATTTTACTGGCCAG    300

BSNT_03257___    301 GAGCCTTCTTCACCATCAATGGCTCTTTTGAAAGGCAAAGAAGTCGTACA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU21860___yp    301 GAGCCTTCTTCACCATCAATGGCTCTTTTGAAAGGCAAAGAAGTCGTACA    350

BSNT_03257___    351 TTTTATTCCGCGTCATGAAATTGAAGGACACGATATGGAAGAAATTATGA    400
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU21860___yp    351 TTTTATTCCGCGTCATGAAATTGAAGGACACGATATGGAAGAAATCATGA    400

BSNT_03257___    401 GAAATCTGACTGCTGCCTTCGATGCGCACTGCTAA    435
                     .||||||||||||||||||||||||||||||||||
BSU21860___yp    401 AAAATCTGACTGCTGCCTTCGATGCGCACTGCTAA    435


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.