Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02967 and BSU17930
See
Amino acid alignment /
Visit
BSNT_02967 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:18
# Commandline: needle
# -asequence dna-align/BSNT_02967___ccdA.1.22522.seq
# -bsequence dna-align/BSU17930___ccdA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02967___ccdA-BSU17930___ccdA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02967___ccdA-BSU17930___ccdA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02967___ccdA
# 2: BSU17930___ccdA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 708
# Identity: 708/708 (100.0%)
# Similarity: 708/708 (100.0%)
# Gaps: 0/708 ( 0.0%)
# Score: 3540.0
#
#
#=======================================
BSNT_02967___ 1 ATGGGAGACGTGAATTATTTTTTGACATTCGGAGCGGGGTTTTTATCCTT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17930___cc 1 ATGGGAGACGTGAATTATTTTTTGACATTCGGAGCGGGGTTTTTATCCTT 50
BSNT_02967___ 51 TATTTCGCCTTGCTGCCTGCCGCTTTACCCAGCTTTTTTGTCATATATTA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17930___cc 51 TATTTCGCCTTGCTGCCTGCCGCTTTACCCAGCTTTTTTGTCATATATTA 100
BSNT_02967___ 101 CAGGGGTCAGCATGGACGATGTAAAAACTGAAAAGCTGCTGCTGCAGAAA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17930___cc 101 CAGGGGTCAGCATGGACGATGTAAAAACTGAAAAGCTGCTGCTGCAGAAA 150
BSNT_02967___ 151 AGAAGCTTGTTTCATACTTTGTGTTTTTTGCTTGGCTTTTCAGTCATTTT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17930___cc 151 AGAAGCTTGTTTCATACTTTGTGTTTTTTGCTTGGCTTTTCAGTCATTTT 200
BSNT_02967___ 201 TATTGCTTTAGGCTATGGAACATCTTTTATTGGCAGCCTGTTTAGGGATT 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17930___cc 201 TATTGCTTTAGGCTATGGAACATCTTTTATTGGCAGCCTGTTTAGGGATT 250
BSNT_02967___ 251 ATCACGATGCGATTCGGCAAATTGGCGCGTTGCTTATTATTTTGTTCGGT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17930___cc 251 ATCACGATGCGATTCGGCAAATTGGCGCGTTGCTTATTATTTTGTTCGGT 300
BSNT_02967___ 301 TTCATTACACTCGGTGTGTTCCGGCCTGAGGCTATGATGAAAGAGCGGAG 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17930___cc 301 TTCATTACACTCGGTGTGTTCCGGCCTGAGGCTATGATGAAAGAGCGGAG 350
BSNT_02967___ 351 AATCCATTTTAAGCATAAACCAAGCGGGTTTTTAGGGTCGGTCTTAATCG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17930___cc 351 AATCCATTTTAAGCATAAACCAAGCGGGTTTTTAGGGTCGGTCTTAATCG 400
BSNT_02967___ 401 GAATGGCATTTGCAGCTGGATGGACACCATGTACCGGTCCGATATTAGCT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17930___cc 401 GAATGGCATTTGCAGCTGGATGGACACCATGTACCGGTCCGATATTAGCT 450
BSNT_02967___ 451 GCTGTTATCACACTTGCAGGCACCAATCCGGGCTCAGCGGTGCCATACAT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17930___cc 451 GCTGTTATCACACTTGCAGGCACCAATCCGGGCTCAGCGGTGCCATACAT 500
BSNT_02967___ 501 GATGTTATATGTACTCGGTTTTGCGGTACCGTTTCTTTTATTGTCTTTTT 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17930___cc 501 GATGTTATATGTACTCGGTTTTGCGGTACCGTTTCTTTTATTGTCTTTTT 550
BSNT_02967___ 551 TTATCACAAAGCTGAAGTGGATAAGGAAGAACCAGCTTTTCATTATGAAA 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17930___cc 551 TTATCACAAAGCTGAAGTGGATAAGGAAGAACCAGCTTTTCATTATGAAA 600
BSNT_02967___ 601 GCTGGTGGCGTTTTGATGATTGTGATTGGTGTGCTGTTATTCTTTAATTG 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17930___cc 601 GCTGGTGGCGTTTTGATGATTGTGATTGGTGTGCTGTTATTCTTTAATTG 650
BSNT_02967___ 651 GATGAGCCTGATCATTATTTTGCTGTCAGATCTTTTTGGAGGCTTTACTG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17930___cc 651 GATGAGCCTGATCATTATTTTGCTGTCAGATCTTTTTGGAGGCTTTACTG 700
BSNT_02967___ 701 GTTTTTGA 708
||||||||
BSU17930___cc 701 GTTTTTGA 708
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.