Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02946 and BSU17790
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:15
# Commandline: needle
# -asequence dna-align/BSNT_02946___yndH.1.22522.seq
# -bsequence dna-align/BSU17790___yndH.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02946___yndH-BSU17790___yndH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02946___yndH-BSU17790___yndH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02946___yndH
# 2: BSU17790___yndH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 633
# Identity: 607/633 (95.9%)
# Similarity: 607/633 (95.9%)
# Gaps: 15/633 ( 2.4%)
# Score: 2991.0
#
#
#=======================================
BSNT_02946___ 1 GTGAGTTCGATTTATGAAAAATCAATTATTAACTATCATTTGCTGCATCC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17790___yn 1 GTGAGTTCGATTTATGAAAAATCAATTATTAACTATCATTTGCTGCATCC 50
BSNT_02946___ 51 CAAGCTGCGGAAACGGTACCAATTAGACGGGTCTCAAACATTCAGCGGGA 100
||||||||.|||||||||||||||||||||||||||.|||||||||||||
BSU17790___yn 51 CAAGCTGCAGAAACGGTACCAATTAGACGGGTCTCATACATTCAGCGGGA 100
BSNT_02946___ 101 CGGGAACGATGTCAGAAATAAGCGGAGGCTCTTTTCTGGTTAGAATGCTG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17790___yn 101 CGGGAACGATGTCAGAAATAAGCGGAGGCTCTTTTCTGGTTAGAATGCTG 150
BSNT_02946___ 151 TTAAAGCTGGGTGTTTTTTTCAGATGCTTCTTTTCAGAAAGAGGCAAAGA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17790___yn 151 TTAAAGCTGGGTGTTTTTTTCAGATGCTTCTTTTCAGAAAGAGGCAAAGA 200
BSNT_02946___ 201 CATTCCATTTACAATACAAAATAGAACTTGTCTTTTGAAATCACAACATA 250
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU17790___yn 201 CATTCCATTTACAATACAAAATAGAACTTGTCTTTTGAAATCGCAACATA 250
BSNT_02946___ 251 CAGGAATAGAATGGAATCGTACATTTATCTTTAAAGGCAAAAAACGTTTC 300
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU17790___yn 251 CAGGAATAGAATGGAATCGTACATTTTTCTTTAAAGGCAAAAAACGTTTC 300
BSNT_02946___ 301 TTTGACGCGATAATGATATATGACGAGAAAGAAAATAGAATACTTGATTT 350
|||||.|||.||||||||||||||||||||||||||||||||||||||||
BSU17790___yn 301 TTTGATGCGTTAATGATATATGACGAGAAAGAAAATAGAATACTTGATTT 350
BSNT_02946___ 351 CTTCGGCAAACCTCATCTGCTGCTGTCTGTTTTGACGTTCGAGGCATCTC 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17790___yn 351 CTTCGGCAAACCTCATCTGCTGCTGTCTGTTTTGACGTTCGAGGCATCTC 400
BSNT_02946___ 401 ATGACGGCTCTCTTACGATCACATCGGGAAAGCAATGGCTATTGATATGC 450
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU17790___yn 401 TTGACGGCTCTCTTACGATCACATCGGGAAAGCAATGGCTATTGATATGC 450
BSNT_02946___ 451 GGAAAAAGAATCCCGTTGCCGAAATGGCTGACCGGTACATCCGTAGTTTG 500
|||||||||||||||.|||||||||||||||||||||||||||.||||||
BSU17790___yn 451 GGAAAAAGAATCCCGCTGCCGAAATGGCTGACCGGTACATCCGAAGTTTG 500
BSNT_02946___ 501 CGAAACGTTTGATGAAAAAAAGAATTGTTTCACCATTGAAGTGCATGTGC 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17790___yn 501 CGAAACGTTTGATGAAAAAAAGAATTGTTTCACCATTGAAGTGCATGTGC 550
BSNT_02946___ 551 AAAATACAATTCTTGGCACTCTTTTCTTTTATAAAGGAACGTTTCAGGAG 600
||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU17790___yn 551 AAAATACAATTCTTGGCACTCTTTTCTTTTATAAGGGAACGTTTCAGGAG 600
BSNT_02946___ 601 GAAGAGAGAGAATCATGCAACGAAATGGCATAG 633
|||||||||||||||||.
BSU17790___yn 601 GAAGAGAGAGAATCATGA--------------- 618
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