Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02783 and BSU17280

See Amino acid alignment / Visit BSNT_02783 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:08
# Commandline: needle
#    -asequence dna-align/BSNT_02783___ymaD.1.22522.seq
#    -bsequence dna-align/BSU17280___ymaD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02783___ymaD-BSU17280___ymaD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02783___ymaD-BSU17280___ymaD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02783___ymaD
# 2: BSU17280___ymaD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 453
# Identity:     446/453 (98.5%)
# Similarity:   446/453 (98.5%)
# Gaps:           0/453 ( 0.0%)
# Score: 2202.0
# 
#
#=======================================

BSNT_02783___      1 ATGGCAGATCATCATTTTTATTTAAAAGCGAATTGGCCGGGTAACCGCAA     50
                     ||||||||||||||||||||||||||||||||.||||||||||||||.||
BSU17280___ym      1 ATGGCAGATCATCATTTTTATTTAAAAGCGAACTGGCCGGGTAACCGTAA     50

BSNT_02783___     51 TGATGTCGGTACGATTGAAAGCGGAAACCTGATCACATCGATTTCCATTC    100
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU17280___ym     51 TGATGTCGGTACGATCGAAAGCGGAAACCTGATCACATCGATTTCCATTC    100

BSNT_02783___    101 CTAAAGAAATGGATGGCCCGGGAGAAGGGACCAACCCAGATGAAATGCTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17280___ym    101 CTAAAGAAATGGATGGCCCGGGAGAAGGGACCAACCCAGATGAAATGCTT    150

BSNT_02783___    151 CTCGGGGCGGCAGCGACCTGTTACATTATTACACTTGCAGCGATGATGGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17280___ym    151 CTCGGGGCGGCAGCGACCTGTTACATTATTACACTTGCAGCGATGATGGA    200

BSNT_02783___    201 GAGAAGCGGGCTGGAAAAAGAAGACTTACAGATGGAGTCAGAAGGCATTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17280___ym    201 GAGAAGCGGGCTGGAAAAAGAAGACTTACAGATGGAGTCAGAAGGCATTG    250

BSNT_02783___    251 TCGACGTCACAAAAGGAGTCTTTACATACAAAAAGATCATTCACCGTCCC    300
                     ||.||||.||||||||||||||||||||||||||||||||||||||||||
BSU17280___ym    251 TCAACGTTACAAAAGGAGTCTTTACATACAAAAAGATCATTCACCGTCCC    300

BSNT_02783___    301 TCTGTCGTGCTTAAACATGATGCTTCACAAGACGACGTCGCATTGGCGCA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU17280___ym    301 TCTGTCGTGCTTAAACATGATGCTTCACAAGACGACGTCGCATTGGCGCA    350

BSNT_02783___    351 CAAGCTTTGTAAAAAAGCGGAGTCGTCATGCATGATTTCGCGTGCAATTC    400
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU17280___ym    351 CAAACTTTGTAAAAAAGCGGAGTCGTCATGCATGATTTCGCGTGCAATTC    400

BSNT_02783___    401 AAGGAAATGTCGTGCTGCAGCTTGAAGCCTCTGTGAAACTGGGTGGAGAA    450
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU17280___ym    401 AAGGAAATGTCGAGCTGCAGCTTGAAGCCTCTGTGAAACTGGGTGGAGAA    450

BSNT_02783___    451 TAA    453
                     |||
BSU17280___ym    451 TAA    453


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