Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02689 and BSU16520

See Amino acid alignment / Visit BSNT_02689 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:54
# Commandline: needle
#    -asequence dna-align/BSNT_02689___frr.1.22522.seq
#    -bsequence dna-align/BSU16520___frr.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02689___frr-BSU16520___frr.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02689___frr-BSU16520___frr.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02689___frr
# 2: BSU16520___frr
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 558
# Identity:     554/558 (99.3%)
# Similarity:   554/558 (99.3%)
# Gaps:           0/558 ( 0.0%)
# Score: 2754.0
# 
#
#=======================================

BSNT_02689___      1 GTGTCAAAAGAAGTATTAACTCAAACAAAAGAAAAAATGGAAAAAGCAAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16520___fr      1 GTGTCAAAAGAAGTATTAACTCAAACAAAAGAAAAAATGGAAAAAGCAAT     50

BSNT_02689___     51 TGCTGCTTATCAGCGCGAATTGGCTACTGTACGCGCAGGCCGTGCAAATC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16520___fr     51 TGCTGCTTATCAGCGCGAATTGGCTACTGTACGCGCAGGCCGTGCAAATC    100

BSNT_02689___    101 CATCATTATTAGATAAAGTAACGGTTGAATATTACGGAGCGCAGACACCT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16520___fr    101 CATCATTATTAGATAAAGTAACGGTTGAATATTACGGAGCGCAGACACCT    150

BSNT_02689___    151 TTAAATCAGTTGTCTTCTATTAACGTGCCTGAAGCTCGTATGCTCGTTAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16520___fr    151 TTAAATCAGTTGTCTTCTATTAACGTGCCTGAAGCTCGTATGCTCGTTAT    200

BSNT_02689___    201 CACACCATACGACAAAACAGCAATCGGCGATATCGAAAAAGCGATTTTAA    250
                     |||.||||||||.||||||||||||||.||||||||||||||||||||||
BSU16520___fr    201 CACGCCATACGATAAAACAGCAATCGGTGATATCGAAAAAGCGATTTTAA    250

BSNT_02689___    251 AAGCTGATTTAGGTCTTACACCAACAAGTGACGGCAATATGATTCGAATT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16520___fr    251 AAGCTGATTTAGGTCTTACACCAACAAGTGACGGCAATATGATTCGAATT    300

BSNT_02689___    301 GCAATTCCGGCACTAACAGAAGAGAGACGGAAAGAATTAGTGAAAGTTGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16520___fr    301 GCAATTCCGGCACTAACAGAAGAGAGACGGAAAGAATTAGTGAAAGTTGT    350

BSNT_02689___    351 AAAAAAATACGCTGAAGAAGCAAAAGTAGCTGTTCGTAACGTTCGCCGTG    400
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU16520___fr    351 AAAAAAATATGCTGAAGAAGCAAAAGTAGCTGTTCGTAACGTTCGCCGTG    400

BSNT_02689___    401 ATGCTAACGATGATCTCAAAAAACTTGAGAAAAACGGAGACATTACTGAG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16520___fr    401 ATGCTAACGATGATCTCAAAAAACTTGAGAAAAACGGAGACATTACTGAG    450

BSNT_02689___    451 GATGAACTGCGTGCTTCCACTGAAGACGTTCAAAAACTGACAGATGAATA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16520___fr    451 GATGAACTGCGTGCTTCCACTGAAGACGTTCAAAAACTGACAGATGAATA    500

BSNT_02689___    501 TGTGTCAAAAATTGACAGTGTCACAAAAGACAAAGAAAAAGAAATCATGG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16520___fr    501 TGTGTCAAAAATTGACAGTGTCACAAAAGACAAAGAAAAAGAAATCATGG    550

BSNT_02689___    551 AAGTTTAA    558
                     ||||||||
BSU16520___fr    551 AAGTTTAA    558


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