Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02246 and BSU13370

See Amino acid alignment / Visit BSNT_02246 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:50
# Commandline: needle
#    -asequence dna-align/BSNT_02246___ykoQ.1.22522.seq
#    -bsequence dna-align/BSU13370___ykoQ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02246___ykoQ-BSU13370___ykoQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02246___ykoQ-BSU13370___ykoQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02246___ykoQ
# 2: BSU13370___ykoQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 813
# Identity:     803/813 (98.8%)
# Similarity:   803/813 (98.8%)
# Gaps:           0/813 ( 0.0%)
# Score: 3975.0
# 
#
#=======================================

BSNT_02246___      1 TTGTTTACAATCTTACTTTCATTGGCCATACTCGTATTTGTGCCATTTCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13370___yk      1 TTGTTTACAATCTTACTTTCATTGGCCATACTCGTATTTGTGCCATTTCT     50

BSNT_02246___     51 ATATAAAGCGAACCGCAATACAAAAGATGTGAAAGTCAACACCATTTCAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13370___yk     51 ATATAAAGCGAACCGCAATACAAAAGATGTGAAAGTCAACACCATTTCAA    100

BSNT_02246___    101 TCGACCAAAAAGACGGCCTTCCAGCCAGAAAAAAATTAAATATCCTTCAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13370___yk    101 TCGACCAAAAAGACGGCCTTCCAGCCAGAAAAAAATTAAATATCCTTCAT    150

BSNT_02246___    151 TTATCAGATCTTCACTTGGAAAACATTTCAGTCTCACCTGAGGAGCTGTA    200
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU13370___yk    151 TTATCTGATCTTCACTTGGAAAACATTTCAGTCTCACCTGAGGAGCTGTA    200

BSNT_02246___    201 TCATTTAACAAAAGATCAGCCTGTGGACATCATTGCTCTTATCGGGGATT    250
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU13370___yk    201 TCATTTAACAAAAGATCAGCCTGTGGACATCATTGCTCTTACCGGGGATT    250

BSNT_02246___    251 TTCTTGATCGGAAACGTAATATTCCGAAGCTGGCAGGTTACTTGAACGCC    300
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU13370___yk    251 TTCTTGATCGGAAACGTAATATTCCGAAACTGGCAGGTTACTTGAACGCC    300

BSNT_02246___    301 TTGCAAAAGCTAAAGCCTGCATATGGAATGTACGCGGTGTTCGGTAACCA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13370___yk    301 TTGCAAAAGCTAAAGCCTGCATATGGAATGTACGCGGTGTTCGGTAACCA    350

BSNT_02246___    351 CGATTATGTATTGAAAGAAGAGGACTTTCAGAGATTGAAGCGAGTTTTAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13370___yk    351 CGATTATGTATTGAAAGAAGAGGACTTTCAGAGATTGAAGCGAGTTTTAG    400

BSNT_02246___    401 AGGAAAACGGCTGTATCACGCTGCAAAATGAACATGTTCGAATCGAGACG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13370___yk    401 AGGAAAACGGCTGTATCACGCTGCAAAATGAACATGTTCGAATCGAGACG    450

BSNT_02246___    451 GCTGCAGGGCCAGTCAATATTATCGGCATTGATGATTACAGTACGAATCG    500
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU13370___yk    451 GCTGCAGGACCAGTCAATATTATCGGCATTGATGATTACAGTACGAATCG    500

BSNT_02246___    501 GAGTAATATCACCGGCTCTTATCAAAGTCTGGAAAATGGCTATTATCTTG    550
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU13370___yk    501 GAGTAATATCACCGGCTCTTATCAAAGTCTGGAAAATGGCTATCATCTTG    550

BSNT_02246___    551 TCTTAACACATGACCCAAATATTATTCTGGATATGAAGGATGTTCATTAT    600
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU13370___yk    551 TCTTAACACATGACCCAAATATTATTCTGGATATGAAAGATGTTCATTAT    600

BSNT_02246___    601 GATTACCTGCTGTCAGGGCATTTTCACGGCGGGCAAATTCACTGGCCAAA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13370___yk    601 GATTACCTGCTGTCAGGGCATTTTCACGGCGGGCAAATTCACTGGCCAAA    650

BSNT_02246___    651 ACCGTATCATTTGGTGAAAATGGGAAACCTCGTGCGAATGAACATGATTA    700
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU13370___yk    651 ACCGTATCATTTGGTGAAAATGGGAAAGCTCGTGCGAATGAACATGATTA    700

BSNT_02246___    701 AAGGCCTTCATTATCATCACGATAAACCATTTTATATCAGCGAGGGCTTG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13370___yk    701 AAGGCCTTCATTATCATCACGATAAACCATTTTATATCAGCGAGGGCTTG    750

BSNT_02246___    751 GGACAAACCGGCGTAAATATCCGTGTCGGAAGCCGTCCTGAAGTGACGTT    800
                     |||||||||||||||||||||||||||||||||||.|||||||||||.||
BSU13370___yk    751 GGACAAACCGGCGTAAATATCCGTGTCGGAAGCCGCCCTGAAGTGACATT    800

BSNT_02246___    801 TCATCAGATATAA    813
                     |||||||||.|||
BSU13370___yk    801 TCATCAGATTTAA    813


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