Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01439 and BSU08670

See Amino acid alignment / Visit BSNT_01439 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:23
# Commandline: needle
#    -asequence dna-align/BSNT_01439.1.22522.seq
#    -bsequence dna-align/BSU08670___ygaB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01439-BSU08670___ygaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01439-BSU08670___ygaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01439
# 2: BSU08670___ygaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 345
# Identity:     312/345 (90.4%)
# Similarity:   312/345 (90.4%)
# Gaps:          33/345 ( 9.6%)
# Score: 1560.0
# 
#
#=======================================

BSNT_01439         1 ---------------------------------ATGATTAAAGGAGGAAA     17
                                                      |||||||||||||||||
BSU08670___yg      1 ATGAGTCAAAGGGTTTGCTTTATGGAGATCGAAATGATTAAAGGAGGAAA     50

BSNT_01439        18 TGTTTATACTTTCATCAGGCTGAAGGAGGAACCGATGACCGAATTTGAAA     67
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08670___yg     51 TGTTTATACTTTCATCAGGCTGAAGGAGGAACCGATGACCGAATTTGAAA    100

BSNT_01439        68 AGCTGGTAAGTGAACAGATGAAAACGATGGATAAGCTTCTCGATCTCCAA    117
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08670___yg    101 AGCTGGTAAGTGAACAGATGAAAACGATGGATAAGCTTCTCGATCTCCAA    150

BSNT_01439       118 TCAGAGCTCGACCGCTGCAAACAAATTGAGGCGGAACTCCGGCATTTGGA    167
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08670___yg    151 TCAGAGCTCGACCGCTGCAAACAAATTGAGGCGGAACTCCGGCATTTGGA    200

BSNT_01439       168 AAGGGATGCAAGGCTGCGTGGGATTCAGGCTGAAATTGCGGTAAAACGGA    217
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08670___yg    201 AAGGGATGCAAGGCTGCGTGGGATTCAGGCTGAAATTGCGGTAAAACGGA    250

BSNT_01439       218 AACACCTTGCCGATATACAGGATATGTTTCAAAAGCAGACAGAGCAGGTC    267
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08670___yg    251 AACACCTTGCCGATATACAGGATATGTTTCAAAAGCAGACAGAGCAGGTC    300

BSNT_01439       268 ATTCGTTCATATCGCAGCTCAGAAAAGCCGTCTTCCTTTGTGTAG    312
                     |||||||||||||||||||||||||||||||||||||||||||||
BSU08670___yg    301 ATTCGTTCATATCGCAGCTCAGAAAAGCCGTCTTCCTTTGTGTAG    345


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