Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00837 and BSU04850

See Amino acid alignment / Visit BSNT_00837 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:15
# Commandline: needle
#    -asequence dna-align/BSNT_00837___ydcP.1.22522.seq
#    -bsequence dna-align/BSU04850___ydcP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00837___ydcP-BSU04850___ydcP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00837___ydcP-BSU04850___ydcP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00837___ydcP
# 2: BSU04850___ydcP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 381
# Identity:     379/381 (99.5%)
# Similarity:   379/381 (99.5%)
# Gaps:           0/381 ( 0.0%)
# Score: 1887.0
# 
#
#=======================================

BSNT_00837___      1 ATGAACTTAAACTTTATTGTACCGGATATCAATATGACTTTTGGAGACAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04850___yd      1 ATGAACTTAAACTTTATTGTACCGGATATCAATATGACTTTTGGAGACAT     50

BSNT_00837___     51 GAAATTCATGGGACTTAACAGAGAAAGGTATGTTTATGATCGTGAAAATA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04850___yd     51 GAAATTCATGGGACTTAACAGAGAAAGGTATGTTTATGATCGTGAAAATA    100

BSNT_00837___    101 ATAAGCGTACTGACGTACTGGAATCTAGGATTTATAACATTGCTAGTGCT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04850___yd    101 ATAAGCGTACTGACGTACTGGAATCTAGGATTTATAACATTGCTAGTGCT    150

BSNT_00837___    151 GTTCAAGGTGGTCAAATTGAAGTAACTATTCCTGAGTATGCTGGGGCAAA    200
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU04850___yd    151 GTCCAAGGTGGTCAAATTGAAGTAACTATTCCTGAGTATGCTGGGGCAAA    200

BSNT_00837___    201 AGAAATTCCTCCTTTTGCAGATATTGAGTTGAAAAACCCAAAAATTAGCG    250
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU04850___yd    201 AGAAATTCCTCCTTTTGCAGATATTGAGTTGAAAAATCCAAAAATTAGCG    250

BSNT_00837___    251 CTATGGCGACTAGTCAAAGGGATTCGACGTATGCCAATGTGATGTGGAAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04850___yd    251 CTATGGCGACTAGTCAAAGGGATTCGACGTATGCCAATGTGATGTGGAAA    300

BSNT_00837___    301 CTTGAAGCTGATGATATTGTTGTTAAAGGTGGCTCTTCTGTGAAACCTGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU04850___yd    301 CTTGAAGCTGATGATATTGTTGTTAAAGGTGGCTCTTCTGTGAAACCTGC    350

BSNT_00837___    351 CGCGGCAACTGGCGGGAATGAAAAGAAATAA    381
                     |||||||||||||||||||||||||||||||
BSU04850___yd    351 CGCGGCAACTGGCGGGAATGAAAAGAAATAA    381


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