Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00499 and BSU02820
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:16:39
# Commandline: needle
# -asequence dna-align/BSNT_00499.1.22522.seq
# -bsequence dna-align/BSU02820___rapJ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00499-BSU02820___rapJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00499-BSU02820___rapJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00499
# 2: BSU02820___rapJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1123
# Identity: 861/1123 (76.7%)
# Similarity: 861/1123 (76.7%)
# Gaps: 251/1123 (22.4%)
# Score: 4251.0
#
#
#=======================================
BSNT_00499 1 ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATG 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02820___ra 1 ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATG 50
BSNT_00499 51 GTACAAGCTCATTCGCGCATTTGAAGCAGATCAAGCAGAAGCGTTAAAGC 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02820___ra 51 GTACAAGCTCATTCGCGCATTTGAAGCAGATCAAGCAGAAGCGTTAAAGC 100
BSNT_00499 101 AGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTT 150
|||||||||||||.|||||||||||||||||||||||.||||||||||||
BSU02820___ra 101 AGGAGATTGAATATGATTTAGAAGATATGGAAGAGAATCAGGACTTGCTT 150
BSNT_00499 151 TTATATTTTTCTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02820___ra 151 TTATATTTTTCTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCT 200
BSNT_00499 201 GATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCTGATATGCTGA 250
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU02820___ra 201 GATGCCGGTGAAAGACAGCGATACCAAGCCTCCGTTCTCTGATATGCTGA 250
BSNT_00499 251 ACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTACTGGAATACTAC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02820___ra 251 ACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTACTGGAATACTAC 300
BSNT_00499 301 TTTTATTATTTCAGAGGAATGTACGAATTCAAGCAGAAAAATTTCATATT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02820___ra 301 TTTTATTATTTCAGAGGAATGTACGAATTCAAGCAGAAAAATTTCATATT 350
BSNT_00499 351 AGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG 400
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU02820___ra 351 AGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG 400
BSNT_00499 401 ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTAT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02820___ra 401 ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTAT 450
BSNT_00499 451 CACATCAAACAAACGTATTTTTCCATGAATTATGCGAGCCAGGCGCTTGA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02820___ra 451 CACATCAAACAAACGTATTTTTCCATGAATTATGCGAGCCAGGCGCTTGA 500
BSNT_00499 501 TATCTATACGAAATATGAGCTGTACGGTCGCCGCCGGGTTCAGTGTGAAT 550
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU02820___ra 501 TATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAAT 550
BSNT_00499 551 TTATCATCGCCGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTG 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02820___ra 551 TTATCATCGCCGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTG 600
BSNT_00499 601 ACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTGAAGAAGCGTA 650
|||||||||||||||||||||||.||||||||||||||||||||||||||
BSU02820___ra 601 ACCCACTTGTGCAGCGCTTTAGAACATGCCAGGCAGCTTGAAGAAGCGTA 650
BSNT_00499 651 CATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGG 700
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU02820___ra 651 CATGATCGCTGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGG 700
BSNT_00499 701 GTGACTACAAAGAAGCGGAGGGCTATTTCAAAACAGCCGCCGCCATTTTT 750
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU02820___ra 701 GTGATTACAAAGAAGCGGAGGGCTATTTCAAAACAGCCGCCGCCATTTTT 750
BSNT_00499 751 GAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU02820___ra 751 GAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA 800
BSNT_00499 801 TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGCAGAGGCGTATGATC 850
|||||||||||||||||||||||||||||||||||.||||||.|||||.|
BSU02820___ra 801 TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCTTATGACC 850
BSNT_00499 851 GCGGGATAAAAGAGCGCGGCTGA--------------------------- 873
||||||| |||||||||||||||
BSU02820___ra 851 GCGGGAT-AAAGAGCGCGGCTGAATGGGAGGATGACATGTACTTGACGAA 899
BSNT_00499 873 -------------------------------------------------- 873
BSU02820___ra 900 ATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGC 949
BSNT_00499 873 -------------------------------------------------- 873
BSU02820___ra 950 TTACAGAATGCTTTGACCTGCTGGAATCCAGGCAGCTTCTTGCTGACGCC 999
BSNT_00499 873 -------------------------------------------------- 873
BSU02820___ra 1000 GAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGTTGGAACATTA 1049
BSNT_00499 873 -------------------------------------------------- 873
BSU02820___ra 1050 CGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGC 1099
BSNT_00499 873 ----------------------- 873
BSU02820___ra 1100 TTGCCGAGCAGCGTTTTCAATAG 1122
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