Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00076 and BSU00410

See Amino acid alignment / Visit BSNT_00076 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:15:56
# Commandline: needle
#    -asequence dna-align/BSNT_00076___rnmV.1.22522.seq
#    -bsequence dna-align/BSU00410___rnmV.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00076___rnmV-BSU00410___rnmV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00076___rnmV-BSU00410___rnmV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00076___rnmV
# 2: BSU00410___rnmV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 561
# Identity:     560/561 (99.8%)
# Similarity:   560/561 (99.8%)
# Gaps:           0/561 ( 0.0%)
# Score: 2796.0
# 
#
#=======================================

BSNT_00076___      1 ATGAAAATTAAAGAGATCATTGTGGTCGAGGGGCGTGACGATACGGCCCG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00410___rn      1 ATGAAAATTAAAGAGATCATTGTGGTCGAGGGGCGTGACGATACGGCCCG     50

BSNT_00076___     51 CATCAAATTGGCTGTTGATGCAGACACAATTGAAACAAATGGTTCAGCCA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00410___rn     51 CATCAAATTGGCTGTTGATGCAGACACAATTGAAACAAATGGTTCAGCCA    100

BSNT_00076___    101 TCGATGATCATGTGATTGACCAAATCCGTTTGGCCCAGAAGACGAGAGGC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00410___rn    101 TCGATGATCATGTGATTGACCAAATCCGTTTGGCCCAGAAGACGAGAGGC    150

BSNT_00076___    151 GTCATTATTTTAACGGATCCGGACTTTCCGGGAGAGAAGATTCGCAAAAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00410___rn    151 GTCATTATTTTAACGGATCCGGACTTTCCGGGAGAGAAGATTCGCAAAAC    200

BSNT_00076___    201 CATCTCAGAGGCTGTACCCGGCTGTAAGCATGCATTTTTGCCAAAACATC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00410___rn    201 CATCTCAGAGGCTGTACCCGGCTGTAAGCATGCATTTTTGCCAAAACATC    250

BSNT_00076___    251 TTGCCAAACCTAAAAACAAGCGGGGAATTGGTGTGGAGCATGCATCGGTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00410___rn    251 TTGCCAAACCTAAAAACAAGCGGGGAATTGGTGTGGAGCATGCATCGGTT    300

BSNT_00076___    301 GAAAGCATTAGGGCATGTTTAGAAAATGTGCATGAGGAGATGGAAGCGCA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00410___rn    301 GAAAGCATTAGGGCATGTTTAGAAAATGTGCATGAGGAGATGGAAGCGCA    350

BSNT_00076___    351 GCCGAGTGACATTTCAGCTGAGGATTTGATTCATGCCGGACTAATAGGCG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00410___rn    351 GCCGAGTGACATTTCAGCTGAGGATTTGATTCATGCCGGACTAATAGGCG    400

BSNT_00076___    401 GGCATGCGGCCAAATGCCGCCGGGAACGACTGGGTGATCTGTTGAAAATC    450
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU00410___rn    401 GGCCTGCGGCCAAATGCCGCCGGGAACGACTGGGTGATCTGTTGAAAATC    450

BSNT_00076___    451 GGCTATACAAATGGCAAACAGCTTCAAAAACGGCTGCAAATGTTTCAAAT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00410___rn    451 GGCTATACAAATGGCAAACAGCTTCAAAAACGGCTGCAAATGTTTCAAAT    500

BSNT_00076___    501 TAAAAAAAGTGATTTTATGAGTGCGCTCGATACCGTTATGCGGGAGGAAC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00410___rn    501 TAAAAAAAGTGATTTTATGAGTGCGCTCGATACCGTTATGCGGGAGGAAC    550

BSNT_00076___    551 AGAATGAATAA    561
                     |||||||||||
BSU00410___rn    551 AGAATGAATAA    561


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