Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00034 and BSU00160
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:15:52
# Commandline: needle
# -asequence dna-align/BSNT_00034___yaaH.1.22522.seq
# -bsequence dna-align/BSU00160___yaaH.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00034___yaaH-BSU00160___yaaH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00034___yaaH-BSU00160___yaaH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00034___yaaH
# 2: BSU00160___yaaH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1284
# Identity: 1266/1284 (98.6%)
# Similarity: 1266/1284 (98.6%)
# Gaps: 0/1284 ( 0.0%)
# Score: 6258.0
#
#
#=======================================
BSNT_00034___ 1 GTGGTAAAACAAGGCGACACTCTTTCTGCTATCGCTTCACAATACAGAAC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00160___ya 1 GTGGTAAAACAAGGCGACACTCTTTCTGCTATCGCTTCACAATACAGAAC 50
BSNT_00034___ 51 AACCGCAAATGAGATCGCTGAAACGAATGAAATACCGAATCCCGACAGCC 100
||||.|||||||.|||.|||||||||||||||||||||||||||||||||
BSU00160___ya 51 AACCACAAATGACATCACTGAAACGAATGAAATACCGAATCCCGACAGCC 100
BSNT_00034___ 101 TTGTTGTCGGACAAACCATTGTCATTCCAATAGCTGGCCAGTTCTATGAT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00160___ya 101 TTGTTGTCGGACAAACCATTGTCATTCCAATAGCTGGCCAGTTCTATGAT 150
BSNT_00034___ 151 GTGAAGCGAGGTGATACCCTGACATCTATCGCCCGGCAGTTCAATACAAC 200
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU00160___ya 151 GTGAAGCGAGGTGATACCCTGACATCCATCGCCCGGCAGTTCAATACAAC 200
BSNT_00034___ 201 GGCAGCCGAGCTCGCAAGGGTTAACCGCATCCAGTTAAATACCGTGCTTC 250
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU00160___ya 201 AGCAGCCGAGCTCGCAAGGGTTAACCGCATCCAGTTAAATACCGTGCTTC 250
BSNT_00034___ 251 AGATTGGTTTCCGTTTATACATCCCACCATCTCCTAAACGAGACATCGAA 300
|||||||||||||||||||||||||.|||.||||||||||||||||||||
BSU00160___ya 251 AGATTGGTTTCCGTTTATACATCCCTCCAGCTCCTAAACGAGACATCGAA 300
BSNT_00034___ 301 TCAAATGCTTATTTGGAGCCCCGAGGAAATCAAGTCAGCGAAAATCTCCA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00160___ya 301 TCAAATGCTTATTTGGAGCCCCGAGGAAATCAAGTCAGCGAAAATCTCCA 350
BSNT_00034___ 351 GCAGGCGGCCAGAGAATCGTCGCCCTACTTAACGTACCTTGGCGCATTCA 400
||||||||||||||||.||||||||||||||||.||||||||||||||||
BSU00160___ya 351 GCAGGCGGCCAGAGAAGCGTCGCCCTACTTAACTTACCTTGGCGCATTCA 400
BSNT_00034___ 401 GCTTCCAGGCACAGCGTAACGGAACCTTAGTCGCACCGCCTTTAACGAAT 450
||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU00160___ya 401 GCTTCCAGGCACAGCGGAACGGAACCTTAGTCGCACCGCCTTTAACGAAT 450
BSNT_00034___ 451 TTAAGGAGCATTACAGAAAGTCAAAATACAACATTGATGATGATTATAAC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00160___ya 451 TTAAGGAGCATTACAGAAAGTCAAAATACAACATTGATGATGATTATAAC 500
BSNT_00034___ 501 GAACCTAGAAAACCAAGCATTCAGCGATGAACTTGGCCGGATCCTTTTGA 550
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU00160___ya 501 GAACCTAGAAAACCAGGCATTCAGCGATGAACTTGGCCGGATCCTTTTGA 550
BSNT_00034___ 551 ACGACGAAACTGTAAAAAGACGGCTTCTAAATGAAATAGTCGAGAATGCC 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00160___ya 551 ACGACGAAACTGTAAAAAGACGGCTTCTAAATGAAATAGTCGAGAATGCC 600
BSNT_00034___ 601 AGAAGATATGGCTTCCGTGACATTCATTTCGACTTTGAATATTTGCGGCC 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00160___ya 601 AGAAGATATGGCTTCCGTGACATTCATTTCGACTTTGAATATTTGCGGCC 650
BSNT_00034___ 651 CCAGGATAGAGAGGCTTATAATCAATTCCTCCGCGAAGCAAGGGATCTTT 700
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU00160___ya 651 CCAGGATAGAGAGGCCTATAATCAATTCCTCCGCGAAGCAAGGGATCTTT 700
BSNT_00034___ 701 TTCATCGAGAGGGCTTAGAAATTTCTACGGCTCTTGCTCCTAAAACAAGT 750
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU00160___ya 701 TCCATCGAGAGGGCTTAGAAATTTCTACGGCTCTTGCTCCTAAAACAAGT 750
BSNT_00034___ 751 GCAACACAGCAGGGCAGATGGTATGAAGCTCATGATTACAGGGCACATGG 800
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU00160___ya 751 GCAACACAGCAGGGCAGGTGGTATGAAGCTCATGATTACAGGGCACATGG 800
BSNT_00034___ 801 CCAAATTGTCGACTTTGTTGTTCTCATGACATATGAATGGGGCTATAGCG 850
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU00160___ya 801 CGAAATTGTCGACTTTGTTGTTCTCATGACATATGAATGGGGCTATAGCG 850
BSNT_00034___ 851 GCGGGCCGCCTCAAGCGGTTTCTCCAATTGGACCTGTCCGTGATGTCATA 900
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU00160___ya 851 GCGGACCGCCTCAAGCGGTTTCTCCAATTGGACCTGTCCGTGATGTCATA 900
BSNT_00034___ 901 GAATATGCTTTGACTGAAATGCCTGCGAACAAAATTGTCATGGGCCAGAA 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00160___ya 901 GAATATGCTTTGACTGAAATGCCTGCGAACAAAATTGTCATGGGCCAGAA 950
BSNT_00034___ 951 TTTATATGGATATGACTGGACGCTGCCATATACAGCAGGGGGAACTCCGG 1000
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU00160___ya 951 TTTATATGGATATGACTGGACGCTGCCATATACAGCAGGGGGAACTCCAG 1000
BSNT_00034___ 1001 CAAGAGCAGTAAGCCCTCAGCAAGCCATTGTCATAGCTGATCAGAACAAT 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00160___ya 1001 CAAGAGCAGTAAGCCCTCAGCAAGCCATTGTCATAGCTGATCAGAACAAT 1050
BSNT_00034___ 1051 GCTTCCATTCAGTATGATCAAACCGCTCAAGCTCCTTTCTTCCGCTATAC 1100
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU00160___ya 1051 GCTTCCATTCAGTATGACCAAACCGCTCAAGCTCCTTTCTTCCGCTATAC 1100
BSNT_00034___ 1101 TGATGCAGAAAACAGAAGGCACGAGGTATGGTTCGAGGATGCCCGCTCGA 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00160___ya 1101 TGATGCAGAAAACAGAAGGCACGAGGTATGGTTCGAGGATGCCCGCTCGA 1150
BSNT_00034___ 1151 TTCAAGCAAAATTCAATCTGATTAAAGAGCTGAATTTAAGAGGCATCAGC 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00160___ya 1151 TTCAAGCAAAATTCAATCTGATTAAAGAGCTGAATTTAAGAGGCATCAGC 1200
BSNT_00034___ 1201 TATTGGAAGCTGGGTCTTTCCTTTCCACAAAACTGGCTGCTGCTGTCTGA 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00160___ya 1201 TATTGGAAGCTGGGTCTTTCCTTTCCACAAAACTGGCTGCTGCTGTCTGA 1250
BSNT_00034___ 1251 TCAATTTAATGTTGTCAAAAAGACGTTTCGATAA 1284
||||||||||||||||||||||||||||||||||
BSU00160___ya 1251 TCAATTTAATGTTGTCAAAAAGACGTTTCGATAA 1284
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