Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03508 and BPUM_3548
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:02
# Commandline: needle
# -asequence dna-align/BSNT_03508___ansA.1.24716.seq
# -bsequence dna-align/BPUM_3548___ansA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03508___ansA-BPUM_3548___ansA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03508___ansA-BPUM_3548___ansA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03508___ansA
# 2: BPUM_3548___ansA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1018
# Identity: 741/1018 (72.8%)
# Similarity: 741/1018 (72.8%)
# Gaps: 56/1018 ( 5.5%)
# Score: 2641.0
#
#
#=======================================
BSNT_03508___ 1 ATGAAAAAATTATTGATGTTGACAACTGGGGGAACGATTGCTTCAGTTGA 50
.||||.|||||||||.|.||.||.|||||.||.||||||||.||.||.||
BPUM_3548___a 1 TTGAAGAAATTATTGCTTTTAACCACTGGTGGGACGATTGCATCTGTAGA 50
BSNT_03508___ 51 AGGGGAAAATGGGCTGGCTCCCGGAGTCAAGGCTGATGAATTATTAAGTT 100
..|.||||||||..|||||||.||.||.||.|||||.||..|.|||||.|
BPUM_3548___a 51 GAGTGAAAATGGTTTGGCTCCAGGTGTTAAAGCTGAGGACCTTTTAAGCT 100
BSNT_03508___ 101 ACGTATCAA--AACTTGATAACGATTACACAATGGAAACTCAGTCGCTTA 148
| |.|.|| ||.||.||...||.|||||||||||.||..||||.||.|
BPUM_3548___a 101 A--TTTAAACGAAATTAATGCAGAGTACACAATGGACACAAAGTCCCTAA 148
BSNT_03508___ 149 TGAATATAGACAGCACCAATATGCAGCCTGAATACTGGGTGGAAATAGCG 198
|||.||||||.||.||.|||||||||||||||||||||||.||.||.||.
BPUM_3548___a 149 TGAGTATAGATAGTACAAATATGCAGCCTGAATACTGGGTAGATATCGCA 198
BSNT_03508___ 199 GAAGCCGTTAAGGAAAATTATGATGCCTATGACGGGTTTGTTATTACTCA 248
..||||.||.|.||||||||||||...||||||||.||||||.|.||.||
BPUM_3548___a 199 ACAGCCATTTATGAAAATTATGATCAATATGACGGCTTTGTTGTCACGCA 248
BSNT_03508___ 249 CGGTACAGATACAATGGCCTATACATCTGCCGCACTATCGTATATGCTGC 298
.||.||.||||||||||||||||||||.||.||||||||.||||||||||
BPUM_3548___a 249 TGGAACCGATACAATGGCCTATACATCAGCAGCACTATCTTATATGCTGC 298
BSNT_03508___ 299 AGCATGCCAAAAAGCCGATTGTCATCACCGGATCGCAGATTCCGATCACG 348
|..||.|..|.|||||.||||||||.||.||.||.||.||.|||||.|||
BPUM_3548___a 299 AAAATCCGGATAAGCCAATTGTCATTACAGGCTCACAAATCCCGATTACG 348
BSNT_03508___ 349 TTCCAAAAAACCGATGCTAAAAAAAATATTACAGATGCCATTCGATTTGC 398
|||.|.|||||.|||||.||.|||||.||.||.|||||.|||||.|||||
BPUM_3548___a 349 TTCAAGAAAACAGATGCGAAGAAAAACATCACTGATGCGATTCGCTTTGC 398
BSNT_03508___ 399 CTGTGAAGGCGTGGGCGGCGTTTATGTTGTATTTGACGGCAGAGTCATTC 448
.|||||.|||||.||||||||.||||||||.|||||.||||||||.||||
BPUM_3548___a 399 ATGTGACGGCGTAGGCGGCGTGTATGTTGTCTTTGATGGCAGAGTGATTC 448
BSNT_03508___ 449 AGGGAACGCGTGCGATCAAATTAAGAACGAAAAGCTACGACGCATTTGAA 498
|.||.||.||.||.||||||||||||||||||||||||||.|||||||||
BPUM_3548___a 449 AAGGGACACGCGCAATCAAATTAAGAACGAAAAGCTACGATGCATTTGAA 498
BSNT_03508___ 499 AGCATCAATTACCCATATATCGCTTTTATC-AATGAAGACGGGATC---- 543
||.||.||.||.||||||||.|| ||| |.||||.|| .|||
BPUM_3548___a 499 AGTATTAACTATCCATATATTGC----ATCGATTGAAAAC--CATCAAAT 542
BSNT_03508___ 544 -GAATACAACAAACAAGTAACGGAACCTGAGAACG--------ACACCTT 584
||||||||.|...|||||| || |||.|| ||..|||
BPUM_3548___a 543 TGAATACAATAGCAAAGTAA---AA----AGATCGTCAATGAAACCGCTT 585
BSNT_03508___ 585 CACAGTTGACACCTCACTATGCACAGATGTATGTCTGCTGAAGCTGCATC 634
|.|.|.|||.|.||..||..|||.||.||.|||||..||||..||||.|
BPUM_3548___a 586 -AAATTAGACGCATCCTTAAACACCGACGTTTGTCTCTTGAAATTGCACC 634
BSNT_03508___ 635 CAGGCTTAAAGCCCGAAATGTTTGATGCCCTGAAAAGCATGTACAAAGGA 684
||||..|||||||.|||.|.||.|||||..|.|||.|..|.||.||||||
BPUM_3548___a 635 CAGGTCTAAAGCCTGAATTCTTAGATGCAATCAAAGGTGTATATAAAGGA 684
BSNT_03508___ 685 ATTGTCATTGAGAGTTATGGCAGCGGAGGGGTGCCGTTTGAAGGCAGAGA 734
.|.||.||.||.||.||.||||||||.||..|.||.||.|||||.|||.|
BPUM_3548___a 685 GTCGTTATCGAAAGCTACGGCAGCGGCGGAATTCCTTTCGAAGGAAGAAA 734
BSNT_03508___ 735 CATTTT-GTCAAAAGTGAATGAGCTGATCGAAAGCGGCATTGTC-GTGGT 782
|.|||| |..|||| |.||.||..||.|||||...|||||| || ||.||
BPUM_3548___a 735 CCTTTTAGAGAAAA-TCAACGAATTGCTCGAAGAAGGCATT-TCTGTTGT 782
BSNT_03508___ 783 CATTACGACTCAATGTCTTGAAGAAGGCGAAGACATGAGCATTTACGAGG 832
|||.||.|||||.||||||||||||||.||||||||||||.|.||.||.|
BPUM_3548___a 783 CATCACAACTCAGTGTCTTGAAGAAGGAGAAGACATGAGCGTGTATGAAG 832
BSNT_03508___ 833 TTGGCCGCAGAGTCAACCAAGACTTAATTATCCGATCAAGAAATATGAAC 882
|.||.||||.|.||||.|||||..|..|....||.|||.||||.||||||
BPUM_3548___a 833 TAGGACGCAAAATCAATCAAGAACTGGTGGCACGTTCACGAAACATGAAC 882
BSNT_03508___ 883 ACAGAAGCAATTGTGCCAAAATTGATGTGGGCGCTAGGTCAGTCTTCGGA 932
||||||||.||.|||||.|||.|.||||||||..|||||.|..|..|.||
BPUM_3548___a 883 ACAGAAGCCATCGTGCCGAAACTCATGTGGGCATTAGGTAAAACAACAGA 932
BSNT_03508___ 933 TCTTCCTGTCGTCAAGAGA----------ATTATGGAAACGCCGATAGCT 972
.| ||||||| |||||||||||||||||.||.
BPUM_3548___a 933 CC----------CAAGAGAAGTGAAAAAGATTATGGAAACGCCGATCGCA 972
BSNT_03508___ 973 GATGACGTTGTCCTGTAA 990
||.||..|.||..|.|||
BPUM_3548___a 973 GAAGATTTAGTGATTTAA 990
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