Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05860 and BPUM_3487
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:26
# Commandline: needle
# -asequence dna-align/BSNT_05860___ywbG.1.24716.seq
# -bsequence dna-align/BPUM_3487___lrgB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05860___ywbG-BPUM_3487___lrgB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05860___ywbG-BPUM_3487___lrgB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05860___ywbG
# 2: BPUM_3487___lrgB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 692
# Identity: 480/692 (69.4%)
# Similarity: 480/692 (69.4%)
# Gaps: 25/692 ( 3.6%)
# Score: 1554.0
#
#
#=======================================
BSNT_05860___ 1 GTGTTCATCGGAATTGTAAGCTTGTTTTTAACGGTTTTGGTGTATTTAGG 50
.||||..|.||..|..||...|||.|.|||||.|||.|..|.|||.|.||
BPUM_3487___l 1 ATGTTAGTTGGCGTACTATTTTTGATCTTAACAGTTCTTTTATATCTCGG 50
BSNT_05860___ 51 AGCAAAAAAGGTATATCAACGCTTTCCGCGTGTTTATACGTCGCCGCTAT 100
|.|||||..|||||||.||||....|||...||.|||...||.|||.||.
BPUM_3487___l 51 ATCAAAAGCGGTATATAAACGACACCCGAAGGTCTATGTCTCACCGTTAC 100
BSNT_05860___ 101 TGGTGACGCCCGCTGTGT--TAGTCGGTC-TGCTGCTGCTGGTGAATGTC 147
|.||||| .||||| ||| |.||| ||| ||||..|..|.||.||..|.
BPUM_3487___l 101 TTGTGAC-ACCGCT-TGTCCTTGTC-GTCTTGCTTTTAATCGTCAACATT 147
BSNT_05860___ 148 CCGTACGAGTCCTATAATCTCGGCGGCGGATTGCTGACCGATATGCTACA 197
||.|||||..|.||.||||..|||||...||.|||.||..|||||||.||
BPUM_3487___l 148 CCTTACGACGCATACAATCAAGGCGGGAAATGGCTCACGAATATGCTTCA 197
BSNT_05860___ 198 GCCGGCCACCGTGGCATTCGCGATCCCGCTATATAAATATTTCCCTGTTT 247
|||.||.||.||.||.||.||.||.||.||.|||||.|||||.|...||.
BPUM_3487___l 198 GCCTGCGACTGTTGCTTTTGCCATTCCCCTCTATAAGTATTTTCACATTC 247
BSNT_05860___ 248 TAAAGAAATACGCAGTGGAAATTATTTTGAATGTGGCCGTCGGTTCATG- 296
|.|||||..|.||||||||||||||||||||||||||...|||||| ||
BPUM_3487___l 248 TGAAGAAGCATGCAGTGGAAATTATTTTGAATGTGGCTTGCGGTTC-TGT 296
BSNT_05860___ 297 CATCGCGATTATTTCTACCGCTCTTATTGCGAAATGGCTTCACCTCGGCA 346
|||.||.||..|.|||||.||..||||.|||||.|.|.|.|||.|.|..|
BPUM_3487___l 297 CATTGCCATCCTATCTACGGCATTTATCGCGAAGTTGTTCCACTTGGATA 346
BSNT_05860___ 347 CCGGCTTAATTGACAGCCTCGTCCCGAGATCAGTGACAACGCCGATCGCG 396
|.|||.|.|||||.||.||.|||||.||.||.||.||||||||..|.|||
BPUM_3487___l 347 CAGGCCTTATTGAAAGTCTTGTCCCAAGGTCGGTCACAACGCCAGTGGCG 396
BSNT_05860___ 397 ATGAACGTATCTGAAATGATCGGCGGAATGCCTGCCGTCACAGCCGTGTT 446
||||..||.||.||||||||.|||||||||||..||||.||.||.||.||
BPUM_3487___l 397 ATGAGTGTGTCAGAAATGATTGGCGGAATGCCGTCCGTTACGGCAGTATT 446
BSNT_05860___ 447 TGTGATTTTAACCGCTTTGCTCGGCACAGTGATCGGTCCGATGGTCATCC 496
.||.|||||||||||..||.|.||..||.|.||||||||.|||.||||.|
BPUM_3487___l 447 CGTCATTTTAACCGCACTGTTTGGGTCAATCATCGGTCCAATGATCATTC 496
BSNT_05860___ 497 GTTATTTCCGCATTGATAACGAAATCGCGCGGGGCGTGCTGCTCGGCACA 546
||||||||||.||.|||||.||.||.||...||||||..||||.||.|||
BPUM_3487___l 497 GTTATTTCCGTATCGATAATGACATTGCCATGGGCGTCTTGCTTGGTACA 546
BSNT_05860___ 547 AGCGCGCACGGAGCGGGAACGTCAAAGGCATTTGAGCTTAGCTCTGTGTC 596
.|.||.|||||.||.|||||.||||||||||||||..|.|||||.||.||
BPUM_3487___l 547 GGTGCACACGGGGCAGGAACATCAAAGGCATTTGAAATGAGCTCCGTCTC 596
BSNT_05860___ 597 CGGCACGATTTCCAGCGTATCGATGATCTTAGCTGCGATTATGACGCTTT 646
.||.|||||.||.||||||||.|||||..|..|.||.||.||.||..|.|
BPUM_3487___l 597 AGGGACGATCTCAAGCGTATCCATGATTATTTCAGCCATCATTACTTTAT 646
BSNT_05860___ 647 GCGCGGCGCCGTT----------TTTGCTTTCATTTATGTAA 678
|.||.|||||..| |||||.| |.|||
BPUM_3487___l 647 GTGCAGCGCCTATCCTCATGTCGTTTGCCT-------TATAA 681
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