Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05675 and BPUM_3359
See
Amino acid alignment /
Visit
BSNT_05675 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:16
# Commandline: needle
# -asequence dna-align/BSNT_05675___ywjG.1.24716.seq
# -bsequence dna-align/BPUM_3359___ywjG.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05675___ywjG-BPUM_3359___ywjG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05675___ywjG-BPUM_3359___ywjG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05675___ywjG
# 2: BPUM_3359___ywjG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 565
# Identity: 366/565 (64.8%)
# Similarity: 366/565 (64.8%)
# Gaps: 77/565 (13.6%)
# Score: 1113.5
#
#
#=======================================
BSNT_05675___ 1 ATGTTGAAAATATTCACGACGCAGTTAACAGGTATTTTTTCCCGCATTCA 50
.||||.|||||.||||||||.||||||.|||||||||||||.||.|||..
BPUM_3359___y 1 TTGTTAAAAATTTTCACGACTCAGTTATCAGGTATTTTTTCACGTATTGG 50
BSNT_05675___ 51 GGATAAGGAATCTGACGCGATTGAAGATGGGGCGCGGCTGCTTGCTCAAG 100
.||.|||.|..||||.|||||.||.|||||.||.||.||.|||||.||.|
BPUM_3359___y 51 AGAAAAGCAGGCTGAAGCGATAGAGGATGGTGCACGCCTTCTTGCACAGG 100
BSNT_05675___ 101 CGGTGATCAGCGGGCATTCCATTTATTTATACGGAGCGAATGAGCTTCAG 150
|.||..||||.||.|||....|.|||||..|||||..||||||.||
BPUM_3359___y 101 CCGTTGTCAGTGGACATGGTGTATATTTTCACGGAAAGAATGAACT---- 146
BSNT_05675___ 151 GGCGTCTTT----TTTGAGGCCACCGAAAGCAAAGAACCCTTCCCATCTG 196
|||..||.| .|.|||||.||.||||||||.||.||.||.||||.||
BPUM_3359___y 147 GGCTGCTGTAGCCCTAGAGGCAACTGAAAGCAAGGAGCCATTTCCATGTG 196
BSNT_05675___ 197 TCAAAGCCTTTCCAGAAAGCGC-TGAGGAAGTGACAGA------------ 233
..||||...|.| ||| |||..|| |||||
BPUM_3359___y 197 CGAAAGTACTGC-------CGCTTGATCAA---ACAGAGCGCAGCTTGCT 236
BSNT_05675___ 234 ------AAGCGACAGGGTGCTGATGTTTTGTTCAGGGACGGGCACAGCC- 276
||||||.||.|||||..|.||||.||||| |.||
BPUM_3359___y 237 TCATCCAAGCGATAGAGTGCTACTATTTTATTCAG----------AACCA 276
BSNT_05675___ 277 GAAGAACAGG---------CGCTCGCAAAAGAGCTTTATGAAAAAGGTGC 317
|||||..||| |.||.|.|||||||||..|.|...||||..|
BPUM_3359___y 277 GAAGACGAGGAGATTGAATCTCTTGTAAAAGAGCTGCACGCGCAAGGGAC 326
BSNT_05675___ 318 GGGAGTCGTATGCGTATC--GCCCGCAGCCAAA--GA-CAGTGCGGGAAT 362
|...||.|| || ||.|| ||||||| |||| || |.||.|..| ||
BPUM_3359___y 327 GCCTGTTGT-TG-GTGTCGGGCCCGCA--CAAAAGGAGCCGTCCATG-AT 371
BSNT_05675___ 363 AGAACAGTATTGTGATGTGCATATTGA-TTCTAAATTAAAAATGCCGCTT 411
.|||.||.||||||||||.|||||||| |||.|..||||.|| |||.|||
BPUM_3359___y 372 TGAAGAGCATTGTGATGTCCATATTGATTTCCAGCTTAAGAA-GCCACTT 420
BSNT_05675___ 412 GTTCCCGATGAAGACGGCACCCGTTACGGGTTTCCCTCTTTAATGACAGC 461
||.||.|.|||.|||||.||..|.|.|||.|.|||..|||||||||||
BPUM_3359___y 421 GTGCCTGCTGATGACGGGACAAGGTTCGGTTATCCTGCTTTAATGACA-- 468
BSNT_05675___ 462 ACTG----TATGTCTATCACGCTTTATCGTTTACACTAAAAGAAATTCTG 507
|| ||.|||||.||||||.||||||||||..|.||||||||..|.
BPUM_3359___y 469 --TGTTTATACGTCTACCACGCTCTATCGTTTACTGTGAAAGAAATCGTT 516
BSNT_05675___ 508 CAAGAGTATGCATAA 522
.|.||.||||.||||
BPUM_3359___y 517 GAGGAATATGAATAA 531
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.