Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05630 and BPUM_3332
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:13
# Commandline: needle
# -asequence dna-align/BSNT_05630___atpB.1.24716.seq
# -bsequence dna-align/BPUM_3332___atpB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05630___atpB-BPUM_3332___atpB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05630___atpB-BPUM_3332___atpB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05630___atpB
# 2: BPUM_3332___atpB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 744
# Identity: 499/744 (67.1%)
# Similarity: 499/744 (67.1%)
# Gaps: 81/744 (10.9%)
# Score: 1773.0
#
#
#=======================================
BSNT_05630___ 0 -------------------------------------------------- 0
BPUM_3332___a 1 TTGGGTCACAGTTCAAAAACGACAGAATTTTTAGGGTTAACGTTCAACTT 50
BSNT_05630___ 1 -------------ATGATTACTGTGGCGAGTGTGATTGTTTTATTGATTG 37
||||||||..|.||.|||.|.||.|||.|..|.||.|
BPUM_3332___a 51 ATCCAATGTTCTCATGATTACGATTGCTAGTATCATCGTTCTTCTCATAG 100
BSNT_05630___ 38 CTATATTGACGACAAGAACG----CTTTCGATCCGTCCCGGAAAAGCCCA 83
|..|..||||.|| .|| ||.||.||.|||||...|||.||.||
BPUM_3332___a 101 CGGTGCTGACTAC----TCGTGTTCTGTCTATTCGTCCGACAAAGGCGCA 146
BSNT_05630___ 84 GAACTTTATGGAATGGATTGTTGATTTCGTACGCAATATTATTGGCAGTA 133
||||||.||||||||||||||||||||.||.||.|||||.||.||.|||.
BPUM_3332___a 147 GAACTTCATGGAATGGATTGTTGATTTTGTTCGAAATATCATAGGTAGTT 196
BSNT_05630___ 134 CAATGGATTTAAAAACAGG-GGCTAACTTCTTGGCACTTGGTGTCACATT 182
|.|||||..|.|||||||| |.|..|.||| |.||.||.||.||.|||||
BPUM_3332___a 197 CGATGGACATGAAAACAGGAGCCCCATTTC-TAGCGCTAGGCGTTACATT 245
BSNT_05630___ 183 GCTGATGTACATATTTGTGTCGAATATGCTGGGGCTGCCGTTCTCTATTA 232
.||.||||||||||||||.||.||.|||||.||.|||||.||.||.|||.
BPUM_3332___a 246 ACTCATGTACATATTTGTTTCAAACATGCTTGGACTGCCATTTTCGATTT 295
BSNT_05630___ 233 CAATCGGACATGAGCTCTGGTGGAAGTCTCCGACAGCCGATCCTGCCATT 282
|..|||..||..|..|.||||||||.||.||.|||||.||.|||||.||.
BPUM_3332___a 296 CGGTCGATCACAACTTGTGGTGGAAATCACCAACAGCAGACCCTGCAATC 345
BSNT_05630___ 283 ACATTAACGCTAGCCGTGATGGTTGTTGCTTTAACCCACTACTATGGTGT 332
|||.|.||.|||||.||.|||||..|.|..||.||.||.|||||||||||
BPUM_3332___a 346 ACAATGACACTAGCGGTTATGGTCATGGGCTTGACACATTACTATGGTGT 395
BSNT_05630___ 333 GAAGATGAAAGGGCTCAAGGAATATTCCAAAGACTATTTAAGACCTGTTC 382
.|||...|||||..|||||||||||.|.||||||||.||.|||||..|||
BPUM_3332___a 396 CAAGGCAAAAGGAGTCAAGGAATATACGAAAGACTACTTTAGACCAATTC 445
BSNT_05630___ 383 CATTCATGCTCCCGATGAAAATCATCGAAGAGTTTGCGAATACGCTGACT 432
||.|..|..|.||..|||||||.||.|||||.|||||.||.|||.|.||.
BPUM_3332___a 446 CACTTTTAGTACCATTGAAAATTATTGAAGAATTTGCAAACACGTTAACA 495
BSNT_05630___ 433 CTAGGTTTACGGCTGTATGGTAACATCTTCGCCGGTGAGATTCTTCTCGG 482
||.|||||.||.||.|||||.|||||.||.||.||.|||||||||||.||
BPUM_3332___a 496 CTTGGTTTGCGTCTTTATGGAAACATTTTTGCTGGAGAGATTCTTCTTGG 545
BSNT_05630___ 483 CCTGCTTGCGGGATTAGCGACAAGCCA----CTATTCGCAAAGCGTGGCT 528
..|||||||.|||.|.|||| ||| |||||||||||.|.|.||.
BPUM_3332___a 546 TTTGCTTGCAGGACTTGCGA----CCAATTTCTATTCGCAAAACATTGCG 591
BSNT_05630___ 529 CTCGGTCTTGTCGGTACAATCGGTGCCATTCTGCCGATGCTGGCATGGCA 578
||.|||.|..|.||||||.|.||||||||..||||||||.|.|.||||||
BPUM_3332___a 592 CTTGGTATCATTGGTACATTAGGTGCCATCGTGCCGATGATTGTATGGCA 641
BSNT_05630___ 579 AGCATTCAGTTTATTTATTGGTGCCATCCAGGCATTTATTTTTACAATGC 628
.|||||||||||.|||.|.||..|.|||||.||||||||.||.||.||||
BPUM_3332___a 642 GGCATTCAGTTTGTTTGTCGGAACAATCCAAGCATTTATCTTCACCATGC 691
BSNT_05630___ 629 TGACGATGGTGTACATGTCTCATAAAATCAGTCATGATCATTAA 672
||||.|||||||||||.|||||||||.||||..||||.||.|||
BPUM_3332___a 692 TGACAATGGTGTACATTTCTCATAAAGTCAGCGATGAACACTAA 735
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