Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05365 and BPUM_3170
See
Amino acid alignment /
Visit
BSNT_05365 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:59
# Commandline: needle
# -asequence dna-align/BSNT_05365___ftsE.1.24716.seq
# -bsequence dna-align/BPUM_3170___ftsE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05365___ftsE-BPUM_3170___ftsE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05365___ftsE-BPUM_3170___ftsE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05365___ftsE
# 2: BPUM_3170___ftsE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 691
# Identity: 549/691 (79.5%)
# Similarity: 549/691 (79.5%)
# Gaps: 8/691 ( 1.2%)
# Score: 2148.0
#
#
#=======================================
BSNT_05365___ 1 ATGATAGAGATGAAGGAAGTATATAAAGCCTATCCGAACGGCGTAAAAGC 50
|||||.||.|||||||||||.||.||...||||||.|||||.|||||.||
BPUM_3170___f 1 ATGATTGAAATGAAGGAAGTCTACAAGATCTATCCTAACGGTGTAAAGGC 50
BSNT_05365___ 51 GCTCAATGGGATTTCTGTTACCATTCATCCCGGTGAGTTTGTGTATGTTG 100
|.|||||||.||...|||..|.|||||.||.||.|||||||||||.||||
BPUM_3170___f 51 GATCAATGGAATCAATGTCTCTATTCACCCAGGAGAGTTTGTGTACGTTG 100
BSNT_05365___ 101 TTGGTCCGAGCGGAGCGGGTAAATCTACTTTTATAAAAATGATTTACAGA 150
|||||||.||.||.||.||||||||.||.||.||.||||||||.||..|.
BPUM_3170___f 101 TTGGTCCCAGTGGTGCTGGTAAATCCACATTCATCAAAATGATGTATCGT 150
BSNT_05365___ 151 GAAGAAAAACCGA-CAAAAGGACAAATTTTAATCAATCATAAAGATCTCG 199
|||||.||.||.| ||||.||| ||||.|||||.|||.|.||||||.|.|
BPUM_3170___f 151 GAAGAGAAGCCAAGCAAAGGGA-AAATCTTAATTAATAACAAAGATTTAG 199
BSNT_05365___ 200 CGACAATTAAAGAAAAAGAGATTCCTTTCGTGCGCCGCAAAATAGGCGTT 249
...|||||||.||||||||.||.||||.|.|..|..|..||||.|||||.
BPUM_3170___f 200 GCTCAATTAAGGAAAAAGAAATACCTTACTTAAGAAGAGAAATTGGCGTA 249
BSNT_05365___ 250 GTCTTTCAGGATTTCAAGCTTCTTCCGAAACTAACTGTTTTTGAAAATGT 299
||.||.||.||||||||.||.|||||.|..||.||.||.|||||.||.||
BPUM_3170___f 250 GTGTTCCAAGATTTCAAACTACTTCCAACTCTCACAGTGTTTGAGAACGT 299
BSNT_05365___ 300 GGCATTTGCCCTTGAAGTGATTGGAGAACAGCCGTC-TGTCATTAAGAAA 348
|||||||||.||||||||.|||||.|||||||| || ..|||||||||||
BPUM_3170___f 300 GGCATTTGCTCTTGAAGTCATTGGGGAACAGCC-TCAAATCATTAAGAAA 348
BSNT_05365___ 349 CGGGTGCTTGAAGTGCTTGATCTCGTGCAGCTGAAGCATAAAGCGCGACA 398
..||||||.||.||.||||||.|.||.||.||.|||||.|||||.|||||
BPUM_3170___f 349 AAGGTGCTGGATGTACTTGATTTGGTACAACTCAAGCACAAAGCACGACA 398
BSNT_05365___ 399 ATTTCCTGACCAGCTTTCAGGCGGGGAGCAGCAGCGTGTATCTATTGCCA 448
|||||||||||||||.||.|||||.|||||||||||||||||.||.||..
BPUM_3170___f 399 ATTTCCTGACCAGCTCTCTGGCGGTGAGCAGCAGCGTGTATCGATCGCTC 448
BSNT_05365___ 449 GATCAATTGTGAACAACCCTGATGTTGTCATTGCTGATGAACCGACAGGA 498
|.||.||.|||||.|..|||||.||.||||||||.||.||.|||||||||
BPUM_3170___f 449 GCTCGATCGTGAATAGTCCTGAGGTAGTCATTGCGGACGAGCCGACAGGA 498
BSNT_05365___ 499 AACCTTGATCCGGATACGTCCTGGGAAGTCATGAAGACGCTGGAGGAAGT 548
|||||||||||.||.||.||.||||||.||||||||||.||.||.||..|
BPUM_3170___f 499 AACCTTGATCCAGACACATCTTGGGAAATCATGAAGACACTCGAAGAGAT 548
BSNT_05365___ 549 TAATAACCGCGGGACAACAGTCGTGATGGCGACACATAATAAAGAAATCG 598
|||||||||.||.|||||||||||.|||||.||||||||.|||||.||.|
BPUM_3170___f 549 TAATAACCGAGGAACAACAGTCGTCATGGCAACACATAACAAAGAGATTG 598
BSNT_05365___ 599 TAAACACCATGAAGAAACGTGTCATTGCAATCGAAGATGGTATCATTGTG 648
||||||.||||||||||||.|||||.||||||||||||||.||.||||||
BPUM_3170___f 599 TAAACAGCATGAAGAAACGCGTCATCGCAATCGAAGATGGAATGATTGTG 648
BSNT_05365___ 649 CGTGATGAGTCAAGAGGGGAGTATGGTTCA--TATGATTAA 687
|||||.||..|||||||||||||.|| || |||||||||
BPUM_3170___f 649 CGTGACGAAGCAAGAGGGGAGTACGG--CATTTATGATTAA 687
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.