Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04778 and BPUM_2891
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:32
# Commandline: needle
# -asequence dna-align/BSNT_04778___yutG.1.24716.seq
# -bsequence dna-align/BPUM_2891___pgpA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04778___yutG-BPUM_2891___pgpA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04778___yutG-BPUM_2891___pgpA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04778___yutG
# 2: BPUM_2891___pgpA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 523
# Identity: 366/523 (70.0%)
# Similarity: 366/523 (70.0%)
# Gaps: 44/523 ( 8.4%)
# Score: 1223.0
#
#
#=======================================
BSNT_04778___ 1 ATG--------TCAGAAAACGAACAATTCAGTCAGATGGAAGCTAA--AG 40
||| |||..|.|.||||.| ||| ||| || || ||
BPUM_2891___p 1 ATGCTGCATCATCACGAGATGAACGA---AGT-AGA---AA---AAACAG 40
BSNT_04778___ 41 CAAGA-GCACGGATGAAGGAGCGCGGCGTTGAGGTATC------AGACAT 83
||||| || ||..|..|.||.||.||| ||||| |||.||
BPUM_2891___p 41 CAAGACGC-CGTTTACAAGAACGAGGC------GTATCCATTCAAGATAT 83
BSNT_04778___ 84 TGCCGAGCTTGTCTTTTTTCTGCAGAAAAAATATCATCCGGATTTAACCA 133
.||.||.|||||||..|||.|.|||.|||||||||||||.|..|||..||
BPUM_2891___p 84 AGCAGACCTTGTCTACTTTTTACAGGAAAAATATCATCCTGGCTTAGACA 133
BSNT_04778___ 134 TTGA-TGAATGCACGCTGAACGTCAATCGTGTTCTCGCAAAACGCGAGGT 182
||| .|||||||..|..||.||..|.|||||..||||||||||.||.||
BPUM_2891___p 134 -TGACAGAATGCATCCACAATGTGGAGCGTGTCATCGCAAAACGAGAAGT 182
BSNT_04778___ 183 GCAAAACGCGATTTTAACGGGCATTGAATTGGATGTTCTTGCTGAGCAGA 232
.|||||.|||||.|||||.|||||||||.|.||.||.||.||.|||||.|
BPUM_2891___p 183 TCAAAATGCGATATTAACAGGCATTGAACTAGACGTACTAGCCGAGCAAA 232
BSNT_04778___ 233 AAAAACTGTCTGAACCGCTGCAAACGATGCTGGAAATAGATGAAAGCCTA 282
||||||||.|.||.|||||.||..|.||.||.||||.|||.||||||||.
BPUM_2891___p 233 AAAAACTGACCGAGCCGCTTCAGTCTATTCTAGAAACAGACGAAAGCCTG 282
BSNT_04778___ 283 TATGGAGTAGATGAAGTTCTGGCATTTTCCATTGTGAACATTTACGGATC 332
||.||.||.||||||.||.|..|.|||.|.||.||.||.|||||.||.||
BPUM_2891___p 283 TACGGTGTTGATGAAATTTTATCCTTTGCTATCGTTAATATTTATGGTTC 332
BSNT_04778___ 333 GATCGGGTTTACGAACTACGGTTACATCGACAAAGAAAAACCCGGAATCC 382
||||||.||||||||.|||||.||.|||||.|||||||||||.|||||.|
BPUM_2891___p 333 GATCGGCTTTACGAATTACGGATATATCGATAAAGAAAAACCAGGAATTC 382
BSNT_04778___ 383 TTAAAC----GATTGAATGATAAATCAACCGGTGAATGCCATACCTTTTT 428
| | ||.|.||.||||||||.||.||.||||||||.||||||||
BPUM_2891___p 383 T----CGGGAGACTCAACGATAAATCCACAGGAGAATGCCACACCTTTTT 428
BSNT_04778___ 429 AGATGACATCGTCGGAGCGATTTCCGCCGCGGCTTCAAGCAGACTTGCTC 478
|||||||||.|||||.||.|||.|.||.||.||.||||||||..|.||.|
BPUM_2891___p 429 AGATGACATTGTCGGCGCCATTGCGGCAGCCGCATCAAGCAGGTTGGCAC 478
BSNT_04778___ 479 ACCGCGCGCGGCATACAGAATAA 501
|..|.|.|.|..||...||||||
BPUM_2891___p 479 ATAGTGTGAGAAATGTGGAATAA 501
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