Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04652 and BPUM_2830
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:25
# Commandline: needle
# -asequence dna-align/BSNT_04652___mrpB.1.24716.seq
# -bsequence dna-align/BPUM_2830___mrpB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04652___mrpB-BPUM_2830___mrpB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04652___mrpB-BPUM_2830___mrpB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04652___mrpB
# 2: BPUM_2830___mrpB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 452
# Identity: 305/452 (67.5%)
# Similarity: 305/452 (67.5%)
# Gaps: 40/452 ( 8.8%)
# Score: 917.5
#
#
#=======================================
BSNT_04652___ 1 GTGAATGAACAAAAA-----ACAAATGACTTGATTCTTCAAACCGCGACA 45
||| |.||||| ||.|||||..||.||.|.|||..|.|.||.
BPUM_2830___m 1 ----ATG-AGAAAAATTGATACGAATGATATGCTTTTACAAGTCACAACC 45
BSNT_04652___ 46 AAACT---TGTATCCTTTATCATTTTGCTTTTCT-CTTTCTATTTATTTT 91
|||.| || |.||.|||||..||||.|||| |.||| |..|.|||.
BPUM_2830___m 46 AAAATCACTG---CATTCATCATCCTGCTCTTCTCCCTTC-ACCTGTTTC 91
BSNT_04652___ 92 TATCAGGGCATAACGCGCCCGGAGGAGGCTTTGTCGGCGGACTGATCACG 141
|..|.||.|||||....||.||.|||||.|||.|.||||||.|.||.| |
BPUM_2830___m 92 TTGCGGGACATAATAATCCAGGCGGAGGATTTATTGGCGGATTAATGA-G 140
BSNT_04652___ 142 T-CCTCTTCCATCGTTCTCTTGCTCTTGGCGTATGATTTAAAAACCGT-- 188
| ||..|.|..||||.||..|||||||.||.||.|||.|.||.||.||
BPUM_2830___m 141 TGCCAGTGCTGTCGTCCTTCTGCTCTTAGCCTACGATCTGAAGACAGTTA 190
BSNT_04652___ 189 ---GCGTTCCCTTTTGCCGGTCAATTTCATTTATGTCG-CGGGAGCCGGC 234
||.||| |||||.||||.||.||.|||||.| ||||| |.||.
BPUM_2830___m 191 GACGCATTC-----TGCCGTTCAACTTTATCTATGTTGCCGGGA-CTGGG 234
BSNT_04652___ 235 CTTCTGCTCGCTGTATTAACAGGCGTTGGCTCCTTTGTCTTCGGGGCTCC 284
|||||..||||..|..|.|||||..|.||.||.|||.|.|||||.||.||
BPUM_2830___m 235 CTTCTCATCGCAATCCTGACAGGTATGGGATCATTTCTATTCGGTGCACC 284
BSNT_04652___ 285 TTTTTTAACCCACACATTCGGATACTTTCAGCTGCCGATCCTTGGGAAA- 333
||||.||.||||..||||.||.||.||.||.|||||| |..||.|||||
BPUM_2830___m 285 TTTTCTATCCCATGCATTTGGTTATTTCCAACTGCCG-TTTTTAGGAAAG 333
BSNT_04652___ 334 ACGGAGCTCGCCACAGCGACGATA---TTTGATTTAGGCGTTTATCTTGT 380
||.||.||.||.||||| || || ||||||.|.||.||.|||||.||
BPUM_2830___m 334 ACAGAACTGGCGACAGC--CG-TACTGTTTGATATCGGTGTCTATCTGGT 380
BSNT_04652___ 381 TGTCGTAGGCATAACGATGACCATTATTCAAACGATTGGAGAGGAAGAAT 430
|||.||.||..|.||.|||||||||||||||||||||||||||.|.||||
BPUM_2830___m 381 TGTTGTCGGTGTCACCATGACCATTATTCAAACGATTGGAGAGAAGGAAT 430
BSNT_04652___ 431 AA 432
||
BPUM_2830___m 431 AA 432
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