Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04647 and BPUM_2825
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:23
# Commandline: needle
# -asequence dna-align/BSNT_04647___yufP.1.24716.seq
# -bsequence dna-align/BPUM_2825.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04647___yufP-BPUM_2825.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04647___yufP-BPUM_2825.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04647___yufP
# 2: BPUM_2825
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1075
# Identity: 773/1075 (71.9%)
# Similarity: 773/1075 (71.9%)
# Gaps: 56/1075 ( 5.2%)
# Score: 2714.0
#
#
#=======================================
BSNT_04647___ 1 -------ATGGTTAAACGACTCT-CTCATTTACTCGTGCCGCTCATCGCA 42
||.|.|.|||.|.||| |||||| |||||.||.||.
BPUM_2825 1 ATGTCTAATCGCTTAACAAATCTGCTCATT--------CCGCTTATAGCC 42
BSNT_04647___ 43 ATCATCCTTGGTCTTGCGGCCGGCGCGTTGATTATGCTTGTGAGCGGCTA 92
|||.|.|||||||||...|..||.||..|.||||||||.|..|||||.||
BPUM_2825 43 ATCGTACTTGGTCTTTTTGTTGGGGCCATTATTATGCTGGCAAGCGGTTA 92
BSNT_04647___ 93 CAGTGT-------GGCTAGCGGATATTCGGCTTTGTGGAATGGGATATTC 135
.||||| |||||..| ||.|.|| ||||||||..|.|||
BPUM_2825 93 TAGTGTCATCGAAGGCTATGG------CGCCCTT-TGGAATGGCGTCTTC 135
BSNT_04647___ 136 GGAGAAATCTATTATGTCGGAGAAACAATCCGGCAAATTACGCCTTATAT 185
||.||||.|||||||.|.||||||||.|||.|.|||.|.||.|||||.||
BPUM_2825 136 GGTGAAACCTATTATATGGGAGAAACCATCAGACAAGTGACACCTTACAT 185
BSNT_04647___ 186 TTTATCCGGATTGGCTGTCGCCTTTGCATTCCGAACCGGACTCTTTAATA 235
||||||.|||.|.|||||.||.||||||||.||.||.||.||||||||||
BPUM_2825 186 TTTATCAGGACTTGCTGTTGCTTTTGCATTTCGGACAGGTCTCTTTAATA 235
BSNT_04647___ 236 TCGGCGTCGAGGGACAGCTGCTCGTCGGCTGGACAGCAGCGGTTTGGGTC 285
||||.||.||.||.||..|||||.|.||||||..|||.||.||.|||.||
BPUM_2825 236 TCGGTGTAGAAGGTCAAATGCTCATTGGCTGGGTAGCTGCTGTATGGATC 285
BSNT_04647___ 286 GGTACGGCGTTTGACGGACCGGCATAT----ATTCACTTGCCGCTCGCAT 331
|||||..|..|..|.|.||| ||| ||.||..|||||||.|||.
BPUM_2825 286 GGTACAACTGTCCATGCACC----TATGTACATCCATCTGCCGCTTGCAC 331
BSNT_04647___ 332 TGATTACAGCGGCAGCTGCAGGAGGATTATGGGGGTTTATTCCCGGCATT 381
|.||.||.||.||.|||||.||.|.|||||||||.||||||||.||..||
BPUM_2825 332 TTATCACCGCAGCTGCTGCTGGTGCATTATGGGGCTTTATTCCTGGGTTT 381
BSNT_04647___ 382 TTGAAAGCGCGATTTTACGTTCATGAAGTCATTGTCACCATTATGATGAA 431
||.||.||.||.|||||.|||||||||||.||||||||.||.||||||||
BPUM_2825 382 TTAAAGGCTCGTTTTTATGTTCATGAAGTGATTGTCACGATCATGATGAA 431
BSNT_04647___ 432 TTATATCGCGCTGCACATGACCAATTACATCATTTCAAACGTCTTGACAG 481
.||.||.||.||.||..||||.||.||..|.||.|||||.|||||.||..
BPUM_2825 432 CTACATTGCCCTTCATGTGACAAACTATTTGATCTCAAATGTCTTAACGA 481
BSNT_04647___ 482 ATCATCAGGACAAGACGGGGAAAATTCACGAATCC---GCCTCCCTCCGC 528
||.||.|.||.||.||.|..||||| |||..|| |||||.||.|||
BPUM_2825 482 ATAATAAAGATAAAACAGAAAAAAT---CGATGCCACTGCCTCACTTCGC 528
BSNT_04647___ 529 TCTCCTTTTCTTGAACAGATCACCGATTACTCACGGCTGCATTTGGGAAT 578
|||..|||..|||||||.||||||||||.|||.|||.|||||...||.||
BPUM_2825 529 TCTGGTTTCTTTGAACAAATCACCGATTTCTCCCGGATGCATAATGGTAT 578
BSNT_04647___ 579 CATCGTTGCCCTTCTCGCAGCAGTTATCATGTGGTTTATCA-TCAACAAA 627
..|.||.|||.||.||||.||.||..|.||||||.|.||.| |||| |||
BPUM_2825 579 TTTTGTCGCCATTATCGCTGCGGTCGTGATGTGGGTCATTATTCAA-AAA 627
BSNT_04647___ 628 ACTACAAAAGGATTTGAGCTCCGGGCGGTCGGGTTTAACCAGCACGCTTC 677
||..|.|||||.|||||..|.|||||.||.||..|.||||||||.||.||
BPUM_2825 628 ACCTCTAAAGGCTTTGAATTGCGGGCTGTTGGAATGAACCAGCAGGCATC 677
BSNT_04647___ 678 CCAGTATGCCGGCATGAGCGTGCGGAAGAATATCATGACCT----CCATG 723
|||.||||||||.||||.|||.||....|||||||| | |.|||
BPUM_2825 678 CCATTATGCCGGTATGAACGTTCGCCGCAATATCAT----TTATGCGATG 723
BSNT_04647___ 724 CTTATCTCCGGCGCTTTTGCAGGCCTTGCCGGAGCCATGGAGGGGCTAGG 773
||.||.||.||.|||||||||||.|||||.||.||.|||||.||.||.||
BPUM_2825 724 CTCATTTCAGGTGCTTTTGCAGGTCTTGCAGGCGCTATGGAAGGTCTTGG 773
BSNT_04647___ 774 AACATTCGAATACGCAGCAGTGAAAGGCGCATTTACCGGCGTAGGCTTTG 823
.|||||.|||||.||..||.|.||||||.|.||||||||.|||||.||||
BPUM_2825 774 TACATTTGAATATGCTTCAATTAAAGGCTCGTTTACCGGTGTAGGTTTTG 823
BSNT_04647___ 824 ACGGTATCGCTGTCGCTCTTCTCGGGGGAAACACAGCCATCGGGGTTATA 873
||||.||||||||||||.|..|.||.||||||||.||..|.||.|||.|.
BPUM_2825 824 ACGGAATCGCTGTCGCTTTATTAGGTGGAAACACCGCTGTTGGTGTTGTT 873
BSNT_04647___ 874 CTGGCAGCA-TGCCTGCTTGGCGGGCTGAAAATCGGCGCATTAAATATGC 922
||.||.||| || ||||||||.||..|||||.||||.||.||||||||||
BPUM_2825 874 CTTGCGGCACTG-CTGCTTGGTGGATTGAAAGTCGGTGCTTTAAATATGC 922
BSNT_04647___ 923 CGATTGAATCAGGCGTTCCATCAGAGGTCGTTGATATTGTGATTGCTATT 972
||.|||||||.|||||.||..|.|||||||||||||||||.|||||.||.
BPUM_2825 923 CGCTTGAATCTGGCGTACCGACTGAGGTCGTTGATATTGTCATTGCGATC 972
BSNT_04647___ 973 ATTATTCTGTTTGTGGCTTCAAGCTATGCGATTCGTTTCGTCATGGGCAA 1022
||||||||.||.||.||.|||||||||...||.|||.|.||.|||..|.|
BPUM_2825 973 ATTATTCTTTTCGTCGCCTCAAGCTATATTATCCGTCTTGTGATGAACCA 1022
BSNT_04647___ 1023 ATTGAAGAAAAAGGGGGCGAACTAA 1047
|.|||||||||||||||..||.|||
BPUM_2825 1023 AATGAAGAAAAAGGGGGGAAAATAA 1047
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