Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02155 and BPUM_2751
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:36
# Commandline: needle
# -asequence dna-align/BSNT_02155___xkdT.1.24716.seq
# -bsequence dna-align/BPUM_2751___xkdT.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02155___xkdT-BPUM_2751___xkdT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02155___xkdT-BPUM_2751___xkdT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02155___xkdT
# 2: BPUM_2751___xkdT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1138
# Identity: 708/1138 (62.2%)
# Similarity: 708/1138 (62.2%)
# Gaps: 179/1138 (15.7%)
# Score: 2019.0
#
#
#=======================================
BSNT_02155___ 1 ATGTTTGAAGATCAGACTTTTGAAGCGATTATGGAGCGTATGCTGAACAG 50
||||||||.||.||.||.|..|||||..|.|||||..|.|||||..||||
BPUM_2751___x 1 ATGTTTGAGGAACAAACGTACGAAGCACTCATGGAAAGAATGCTAGACAG 50
BSNT_02155___ 51 CATTTCCGCAGAT---ATTGACACAAGAGAAGGCAGCGTCATTTATAATG 97
|.|.| ||||| ||.||.|.|||||||..|||||||||||..||||
BPUM_2751___x 51 -ACTGC--CAGATGACATAGATAAAAGAGAAAACAGCGTCATTTGGAATG 97
BSNT_02155___ 98 CGTTAGCCCCGGCGGCGGCCGAGCTTGCGAAGTCTTATATATGGCTGGAT 147
|.||.||.||.||.||.||.||..|.||..||||.|||||.|||||.|||
BPUM_2751___x 98 CCTTGGCACCTGCTGCCGCTGAATTGGCACAGTCCTATATTTGGCTTGAT 147
BSNT_02155___ 148 ACTGTGCTTGAGCTCGTTTTTTCTGATACCGCACAAGGCGAATTTTTAGA 197
...||..|.|||||.||.|||.|.|||||.||||||||.||.||||||||
BPUM_2751___x 148 CAAGTATTCGAGCTGGTCTTTGCAGATACAGCACAAGGAGAGTTTTTAGA 197
BSNT_02155___ 198 CAGGCGTGCAGCGGAAGCGGGAATTGAACGGACAGCCGCGACAAAGGCGG 247
.||.||.||.||.||||..|||||||||.|.|.|.|.||.||.||.||||
BPUM_2751___x 198 TAGACGGGCTGCTGAAGTAGGAATTGAAAGAAAACCAGCAACTAAAGCGG 247
BSNT_02155___ 248 T--------------------CAGAGCGGGAGAGTTTACATCTGGAGTTA 277
| |||| |||.| |..|||||
BPUM_2751___x 248 TTTGGTCCGTAGCCATTCAGCCAGA---GGATA-TCAACATC-------- 285
BSNT_02155___ 278 CTATTCCTGTCGGCTCCCGCTTTTACGTGGATAATCTTTATTTTCAATAT 327
||.|..||||||||.||||...|.||..|..|.|||||.||||||
BPUM_2751___x 286 -----CCAGCTGGCTCCCGGTTTTTTATTGAAGACGTCTATTTCCAATAT 330
BSNT_02155___ 328 ACGGCAGACGGGACACTCATCTGTGAAACACCTGGTGAAG-CAGGAAACG 376
.||...||.||.||.||....||.||.||||||||..||| |.|.||..|
BPUM_2751___x 331 TCGAACGATGGCACGCTAGAATGCGAGACACCTGGCAAAGTCGGCAATGG 380
BSNT_02155___ 377 CCAAT---CTGACCGGACGCAATTTACTGTCATTGGATACCATTCCCGGT 423
.|||| |.||.|.|.||| |.||.|||.|.|||||.|||||.||.
BPUM_2751___x 381 TCAATTAACAGATCAGCCGC----TGCTTTCACTTGATACAATTCCGGGG 426
BSNT_02155___ 424 TTAGAAACGGCCATAGTCAAAGAAATCCTGATTCCGGGACGCGAGGAAGA 473
.|.|||.|....||..|.|||||..|..||||.||.||||..||||||||
BPUM_2751___x 427 CTTGAATCAATTATCATGAAAGATTTGGTGATACCCGGACAAGAGGAAGA 476
BSNT_02155___ 474 GGGAGATGACAGCTTGCG-----AGAACGGTATTTTACAAGGGTTCGGCG 518
||||||| |||| || .||.||.||.||.|.|.|.|.|.||||
BPUM_2751___x 477 ---AGATGAC-GCTT-CGTTATACGATCGTTACTTAATACGTGCTAGGCG 521
BSNT_02155___ 519 TGAGGCCGTCAGTGCCAATAAAATGCATTATAAAGAGTGGGCTGAGGAAG 568
.|||||.|||||||||||.||...|||.||||||.|.|||||||||||||
BPUM_2751___x 522 GGAGGCTGTCAGTGCCAACAAGGCGCACTATAAAAAATGGGCTGAGGAAG 571
BSNT_02155___ 569 TGGACGGTG-TGGGAAAGGCAAAGATCTTCCCGCTTTGGAACGGTGAAGG 617
|||..|||| |||.|.||..|||| |.||||||||||||||.||.|||||
BPUM_2751___x 572 TGGCAGGTGTTGGCAGAGCGAAAG-TATTCCCGCTTTGGAATGGAGAAGG 620
BSNT_02155___ 618 CACGGTCAAAATTGTCGTCAC-GAATGCGAATCTTGAGCCCGC-----TT 661
|||.||||||||||||.|||| ||..|| |||||.||...||| .|
BPUM_2751___x 621 CACAGTCAAAATTGTCATCACAGACGGC-AATCTAGATATCGCATCAGAT 669
BSNT_02155___ 662 CTCCTATTTTAATTCAAAAAGTGAAAGATTATATCGACCCTGAACCAGGG 711
||.|| |.||| |||.|||..|.||.|||||.|||||.|..|||||.
BPUM_2751___x 670 CTGCT-TGTTA----AAAGAGTACAGGAATATATTGACCCAGTGCCAGGC 714
BSNT_02155___ 712 CAGGGAGAGGGACAGGCGCCAATCGG------AGCCGTTGTCACAGTGGA 755
.|.|||||.|||||.|||||.||||| ||| .||.||.||
BPUM_2751___x 715 GAAGGAGAAGGACAAGCGCCTATCGGTTCAAAAGC------GACCGTCGA 758
BSNT_02155___ 756 AAGCGCGGTCTGGAAGGAAGTTGAGATTTCTGCCGAAGT-GCTCCCTGAG 804
||||||....|||..|||..||||.|| .||||| || |
BPUM_2751___x 759 AAGCGCCAAATGGCTGGACATTGACAT------AGAAGTAGC-------G 795
BSNT_02155___ 805 ATCAATCAC-TCAA-------------TTGATGAAGTGAAGTCAGAAATT 840
.||.| || |||| ||||.|.||.|.||..||||||.
BPUM_2751___x 796 GTCGA--ACTTCAAATGGACTGGACCCTTGAAGGAGCGCAGAAAGAAATA 843
BSNT_02155___ 841 GAGG--------AAGGCG-TTTTG-AATCTCTTTAAGAAAATGGCGTTTG 880
||.| ||.||| |.||| |||| |||.||.||||
BPUM_2751___x 844 GAAGAAAAGGTCAAAGCGCTGTTGAAATC----------AATCGCATTTG 883
BSNT_02155___ 881 AAGATAACGT--CA--------TCCGCCTTTCTCAAATTAACAATATCGT 920
||.|.| || || |||||.|| ||||.|
BPUM_2751___x 884 AAAAGA--GTACCATTCGAATGTCCGCATT----AAATGA---------- 917
BSNT_02155___ 921 CTATAATTCACCA-TCAGTCAGT------GACTACTCCAA---TATTCAA 960
|||..|..|||| ||||..||| ||.|| |.||| |||| |
BPUM_2751___x 918 -TATTTTGTACCATTCAGAAAGTGTATCAGATTA-TGCAAACGTATT--A 963
BSNT_02155___ 961 ATCAACGGCACGTCTGAAAATCTGGTGCTG-AGCGACGTGGAAATTCCTA 1009
.|.||.||...|||..||||..|.||..|| || |||.|.||.||.||..
BPUM_2751___x 964 TTGAATGGGGAGTCAAAAAACTTAGTATTGCAG-GACATTGAGATACCGC 1012
BSNT_02155___ 1010 AGCTTGGGCAGGTGAAGATCATTGAGCAAACAAGATGA 1047
..||..|||||||||||.|.||||||||||||.|||||
BPUM_2751___x 1013 GTCTGAGGCAGGTGAAGGTTATTGAGCAAACAGGATGA 1050
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