Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04323 and BPUM_2616
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:52
# Commandline: needle
# -asequence dna-align/BSNT_04323___acsA.1.24716.seq
# -bsequence dna-align/BPUM_2616___acsA1.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04323___acsA-BPUM_2616___acsA1.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04323___acsA-BPUM_2616___acsA1.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04323___acsA
# 2: BPUM_2616___acsA1
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1777
# Identity: 1310/1777 (73.7%)
# Similarity: 1310/1777 (73.7%)
# Gaps: 110/1777 ( 6.2%)
# Score: 4763.0
#
#
#=======================================
BSNT_04323___ 1 ATGAATTTGAAAGCGTTACCAGCAATAGAGGGGGATCATAACTTAAAAAA 50
|||||..||.||.||.|||||.||.||.|.|||||..||.|.|||||..|
BPUM_2616___a 1 ATGAAAGTGGAAACGCTACCATCAGTAAAAGGGGACTATCATTTAAATGA 50
BSNT_04323___ 51 CTATGA--------AGAAACGTACCGGCATTTTGATTGGGCCGAGGCAGA 92
.||||| |.||| |.|||||.| ||||..||.||| |
BPUM_2616___a 51 TTATGAGCAGGCATACAAA-------GAATTTTCA-TGGGAAGAAGCA-A 91
BSNT_04323___ 93 G-AAACATTTCTCTTGGCATGAGACAGGGAAAC-TGAATGCGGCGTATGA 140
| |||.|.|||||.|||.||||.||| |||||| |.|||||.||.|||||
BPUM_2616___a 92 GAAAAAACTTCTCATGGTATGAAACA-GGAAACATAAATGCAGCCTATGA 140
BSNT_04323___ 141 AGCGATTGACCGCCATGCCGAATCGTTTCGAAAAAACAAAGTAGCGCTTT 190
||||||||||.|.|||||.||.||||||||.||.|||||.||.||||||.
BPUM_2616___a 141 AGCGATTGACAGACATGCGGACTCGTTTCGCAAGAACAAGGTGGCGCTTC 190
BSNT_04323___ 191 ATTATAAAGACGCAAAAAGGGATGAAAAATACACATTTAAAGAAATGAAG 240
|.||.|||||..||.|..||||||||||.||.||.||.|.|||.|||||
BPUM_2616___a 191 ACTACAAAGATTCACAGCGGGATGAAAAGTATACGTTCAGAGACATGAA- 239
BSNT_04323___ 241 GAAGAAT-----CAAACAGAGCCGGGAATGTGCTGAGACGGTATGGAA-- 283
||| ||||.|.|||.||.|||.||.|.||| |||
BPUM_2616___a 240 ----AATCAACACAAATAAAGCGGGCAATCTGTTCAGA-------GAAAA 278
BSNT_04323___ 284 -----ATGTGGAAAAAGGGGACCGCGTTTTTATTTTTATGCCGAGATCAC 328
|||||.||||||||||.|||.|.|||||.||||||||.|||||||
BPUM_2616___a 279 GGCGCATGTGCAAAAAGGGGATCGCATATTTATCTTTATGCCTAGATCAC 328
BSNT_04323___ 329 CCGAGCTTTATTTTATTATGCTTGGCGCAATCAAAATTGGCGCCATCGCC 378
|.|||||.||||||.||.||||||||||..|.||||||||.||.||.|..
BPUM_2616___a 329 CTGAGCTCTATTTTCTTCTGCTTGGCGCCGTTAAAATTGGTGCGATTGTT 378
BSNT_04323___ 379 GGGCCGCTGTTCGAAGCATTTATGGAGGGAGCGGTGAAAGATCGGCTTGA 428
||.|||.|.||.||.|||||||||||.||.|||||.|||||.||..|.||
BPUM_2616___a 379 GGTCCGTTATTTGAGGCATTTATGGAAGGTGCGGTCAAAGACCGTTTAGA 428
BSNT_04323___ 429 AAACAGTGAGGCAAAGGTTGTTGTCACAACACCTGAGCTGCTGGAGAGAA 478
|||.||.|||||.|||||..||||.|||||.||.||.|||||.||..|||
BPUM_2616___a 429 AAATAGCGAGGCGAAGGTCATTGTGACAACGCCGGATCTGCTTGAACGAA 478
BSNT_04323___ 479 TACCGGTAGACAAACTGCCTC----ACTTGCAGCATGTCTTCGTAGTCGG 524
|.||..|.| ||.| ||.|| |||||.|.| |||..|..|.||.||
BPUM_2616___a 479 TTCCATTTG-CAGA--GCTTCCGAAACTTGAATC-TGTTATTATTGTTGG 524
BSNT_04323___ 525 GGGAG---AGGCTGAGAGCG-----GCACGAATATCATCAATTATGATGA 566
.||.| |||..||.|.|| |..||.|.| |||.|||||||.||
BPUM_2616___a 525 CGGTGATAAGGAAGATATCGATGGTGTTCGGACA--ATCCATTATGAAGA 572
BSNT_04323___ 567 AGC-----AGCGAAACAGG----AAAGCACAAGACTGGATATCGAATGGA 607
||| || |||| .|||.|| ||.||.||||||||||
BPUM_2616___a 573 AGCTTTTGAG-----CAGGCGGCGAAGGAC----CTTGAAATCGAATGGA 613
BSNT_04323___ 608 TGGATAAAAAAGACGGCTTTCTGCTTCACTATACATCAGGTTCCACTGGT 657
|||||.||||||||||||||||||||||.||.||.|||||.||.||.|||
BPUM_2616___a 614 TGGATGAAAAAGACGGCTTTCTGCTTCATTACACGTCAGGGTCGACAGGT 663
BSNT_04323___ 658 ACGCCAAAGGGCGTGCTGCATGTCCATGAAGCGATGATTCAGCAATATCA 707
||||||||.||.|||||.||||||||||..||.|||.|.|||||..||||
BPUM_2616___a 664 ACGCCAAAAGGTGTGCTACATGTCCATGGTGCAATGGTGCAGCAGGATCA 713
BSNT_04323___ 708 AACAGGAAAGTGGGTCCTTGATTTAAAGGAAGAAGACATTTATTGGTGCA 757
.||.||.||.|||||.||||||.|.||||||||.|||.|.||.|||||.|
BPUM_2616___a 714 GACTGGTAAATGGGTGCTTGATCTGAAGGAAGATGACGTCTACTGGTGTA 763
BSNT_04323___ 758 CGGCTGATCCAGGCTGGGTGACAGGTACGGTATACGGCATTTTTGCACCG 807
|.|||||.||.||||||||.|||||.||.||.||||||||||||.|||||
BPUM_2616___a 764 CAGCTGACCCGGGCTGGGTAACAGGCACAGTGTACGGCATTTTTTCACCG 813
BSNT_04323___ 808 TGGCTGAACGGAGCGACAAATGTCATCGTCGGCGGACGTTTCAGCCCGGA 857
|||.|.||.||.|||||.||||||||..|.|||||..|.||.|..||.||
BPUM_2616___a 814 TGGTTAAATGGGGCGACGAATGTCATTTTGGGCGGCAGATTTAATCCTGA 863
BSNT_04323___ 858 AAGCTGGTATGGTACGATTGAA-CAGCTTGGCGTCAATGTCTGGTACAGC 906
.|..|||||||..||||||||| || ||.||.||.|..||.|||||.||.
BPUM_2616___a 864 TACGTGGTATGAAACGATTGAATCA-CTAGGTGTGACCGTTTGGTATAGT 912
BSNT_04323___ 907 GCGCCGACCGCTTTTCGGATGCTGATGGGAGCGGGAGATGA--------A 948
||.||||||||.|||.|.|||||.|||||.||.|||||||| |
BPUM_2616___a 913 GCACCGACCGCCTTTAGAATGCTAATGGGGGCAGGAGATGACCTCATTCA 962
BSNT_04323___ 949 ATGGCTGCGAAATATGATCTAACTTCACTCCGGCATGTGCTCAGTGTCGG 998
| |||||||||||.|..||.||.||.||||||.|.|||||.||
BPUM_2616___a 963 A--------AAATATGATCTCAGCTCGCTTCGTCATGTGTTAAGTGTAGG 1004
BSNT_04323___ 999 TGAGCCGCTAAATCCGGAAGTCATCAGATGGGGACATAAAGTTTTTAACA 1048
||||||.||.|||||.|||||.||..|.||||||.|....||.|||..||
BPUM_2616___a 1005 TGAGCCTCTGAATCCAGAAGTTATACGCTGGGGAGACGCTGTATTTGGCA 1054
BSNT_04323___ 1049 AACGAATTCATGATACATGGTGGATGACAGAAAC--GGGCAGTCAGCTTA 1096
|||||||||||||.||.|||||||||||.||||| |.||| |||||.|
BPUM_2616___a 1055 AACGAATTCATGACACTTGGTGGATGACGGAAACCGGTGCA--CAGCTGA 1102
BSNT_04323___ 1097 TCTGCAACTATCCTTGCATGGATATTAAACCGGGTTCAATGGGTAAGCCG 1146
|.||.||.|.|||.||.|||||.||||||||.|||||||||||.||.|||
BPUM_2616___a 1103 TTTGTAATTTTCCATGTATGGACATTAAACCAGGTTCAATGGGGAAACCG 1152
BSNT_04323___ 1147 ATTCCAGGAGTGGAGGCAGCGATCGTTGACAATCAAGGCAACGAGCTTCC 1196
||||||||.||.||.||.|||||.||.||.|||...||.||.||.|||||
BPUM_2616___a 1153 ATTCCAGGCGTAGAAGCTGCGATTGTGGATAATGCCGGAAATGAACTTCC 1202
BSNT_04323___ 1197 GCCGTACCGAATGGGCAATCTCGCCATCAAAAAGGGCTGGCCTTCCATGA 1246
|||.||.||.||||||||.||||||||||||||.||||||||.||.||||
BPUM_2616___a 1203 GCCATATCGGATGGGCAACCTCGCCATCAAAAAAGGCTGGCCGTCTATGA 1252
BSNT_04323___ 1247 TGCATACCATTTGGAATAACCCTGAAAAGTATGAATCGTATTTCATGCCG 1296
|||||||.||.|||||.||.||||||||.||||||||.||.||.||||||
BPUM_2616___a 1253 TGCATACGATCTGGAACAATCCTGAAAAATATGAATCTTACTTTATGCCG 1302
BSNT_04323___ 1297 GGCGGCTGGTATGTGTCTGGGGATTCTGCTTACATGGATGAAGAGGGATA 1346
||.|..||||||||.||.||.|||||.|||||.|||||.|||||.|||||
BPUM_2616___a 1303 GGAGATTGGTATGTTTCAGGAGATTCAGCTTATATGGACGAAGACGGATA 1352
BSNT_04323___ 1347 CTTTTGGTTCCAAGGCAGAGTTGATGACGTCATCATGACCTCCGGTGAGC 1396
||||||||||||.||..|.||.|||||.||.||||||||.||.||.||||
BPUM_2616___a 1353 CTTTTGGTTCCAGGGACGTGTCGATGATGTGATCATGACATCAGGAGAGC 1402
BSNT_04323___ 1397 GCGTCGGCCCATTTGAAGTGGAAAGCAAGCTGGTCGAACATCCGGCTATT 1446
|.||.||.||.|||||.|||||||||||..||||.|||||||||||.|||
BPUM_2616___a 1403 GGGTTGGTCCTTTTGAGGTGGAAAGCAAATTGGTTGAACATCCGGCGATT 1452
BSNT_04323___ 1447 GCAGAAGCAGGCGTAATCGGAAAACCTGACCCGGTGCGTGGAGAAATCAT 1496
|||||.||.|||||.||.||.|||||.||.|||||.||.||.|||||.||
BPUM_2616___a 1453 GCAGAGGCTGGCGTCATTGGGAAACCAGATCCGGTCCGCGGGGAAATTAT 1502
BSNT_04323___ 1497 TAAAGCCTTTATTGCACTCAGGGAA--GGATTTGAGCCTTCTGATAAACT 1544
||||||.||.|||||.||.| ||| ||||.||||||..|.|||.||||
BPUM_2616___a 1503 TAAAGCATTCATTGCGCTTA--GAAGCGGATATGAGCCGACAGATGAACT 1550
BSNT_04323___ 1545 GAAAGAAGAGATCCGCCTA--TTCGTAAAGCAGGGTCTTGCAGCCCATGC 1592
.||.||||||||.|| || ||.||.||..|.||.||.||.||.|||||
BPUM_2616___a 1551 CAAGGAAGAGATTCG--TACGTTTGTGAAAAAAGGACTCGCTGCACATGC 1598
BSNT_04323___ 1593 GGCTCCGCGTGAGATCGAATTTAAAGATAAGCTTCCGAAAACCCGAAGCG 1642
|||.|||.|.||.|||||.||||||||.||.||.||.|||||.|||||||
BPUM_2616___a 1599 GGCACCGAGAGAAATCGAGTTTAAAGACAAACTGCCTAAAACGCGAAGCG 1648
BSNT_04323___ 1643 GAAAGATCATGAGGCGCGTGCTGAAGGCATGGGAGCTTAATCTTCCTGCT 1692
||||.||.|||||.||.|||||.|||||.|||||.||.|||.|.||.|||
BPUM_2616___a 1649 GAAAAATTATGAGACGTGTGCTAAAGGCGTGGGAACTGAATTTACCAGCT 1698
BSNT_04323___ 1693 GGAGATCTGTCAACAATGGAGGATTAA 1719
||.||.||.||.||||||||.||||||
BPUM_2616___a 1699 GGCGACCTATCGACAATGGAAGATTAA 1725
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