Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03783 and BPUM_2272
See
Amino acid alignment /
Visit
BSNT_03783 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:19
# Commandline: needle
# -asequence dna-align/BSNT_03783___yqeZ.1.24716.seq
# -bsequence dna-align/BPUM_2272___yqeZ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03783___yqeZ-BPUM_2272___yqeZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03783___yqeZ-BPUM_2272___yqeZ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03783___yqeZ
# 2: BPUM_2272___yqeZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1394
# Identity: 902/1394 (64.7%)
# Similarity: 902/1394 (64.7%)
# Gaps: 160/1394 (11.5%)
# Score: 2589.5
#
#
#=======================================
BSNT_03783___ 1 TTGCTTCAAATCAAAGGATTCCGTGCTGCTCTTTTGGGTATATTTT---- 46
.||....||||.||| |||.| |..||||||.||..|| |.||||
BPUM_2272___y 1 ATGAAAAAAATAAAA--ATTTC-TATTGCTCTCTTCAGT-TGTTTTATAA 46
BSNT_03783___ 47 --TGCTTTCTTTATTAGGCGTACAGCTGAACGCAAAAGCAGAAAAGCAAA 94
||||| .||||||||.||.||..|||.|||.|||.|||.|.|.||.|
BPUM_2272___y 47 TATGCTT--ATTATTAGGGGTTCAATTGACCGCGAAATCAGTAGATCAGA 94
BSNT_03783___ 95 CTGTTTATGTGATTCCGGTTGAAAAAAATGTCGAACAGGGTCTCGTCT-- 142
..|||.||||.||.||..|||||.|.|..||.|||.|.||.|| .|||
BPUM_2272___y 95 AAGTTCATGTTATCCCAATTGAAGATACAGTAGAAAAAGGACT-TTCTAA 143
BSNT_03783___ 143 CGTTTTTGTCCCGTTCGTTACAAGACGCAAAGGATGCACATGCAGACCAT 192
..||.||| ..||.||.||..|..|.||.|||...|.||..||..|.|||
BPUM_2272___y 144 ATTTATTG-AACGATCATTTGAGCATGCTAAGTCCGAACGAGCGAAACAT 192
BSNT_03783___ 193 ATTATTCTTGATATCAATAC-CCCGGGGGGATTG--GTCAAATCTGCTAT 239
||.|||||.||.|||||||| |||||.|| || |||.|..|.||..|
BPUM_2272___y 193 ATCATTCTAGACATCAATACGCCCGGTGG---TGCAGTCGATGCCGCGCT 239
BSNT_03783___ 240 TGATATGGCCGATTTGATAACCGATA-----GC----GAGATCCCCGTAA 280
|||.||.||.||| || || || ||.||.||.||.|
BPUM_2272___y 240 TGAGATTGCAGAT------AC---TATTCGTGCGTCTGATATTCCTGTGA 280
BSNT_03783___ 281 CTGCATATGTCAA-CAAACGCGCGTTGTCTGCTGGTGCATATATTGCACT 329
|.||.|.|||.|| ||.| |.|||.|.||.||.||.||||...|||||||
BPUM_2272___y 281 CAGCGTTTGTGAATCATA-GAGCGCTTTCAGCCGGGGCATTCCTTGCACT 329
BSNT_03783___ 330 TCAAGCAGATCACATTTATATGGCGCCTGGCGGAAAAATGGGAGCCGCCG 379
..|.||.|||||.|||||||||.|.||....|||||.|||||.||.||.|
BPUM_2272___y 330 AAATGCCGATCAAATTTATATGACCCCAAATGGAAAGATGGGGGCTGCTG 379
BSNT_03783___ 380 CGATTGTTGATGGCCAAGGCAATGCCGCTGACCAAAAAGCTCAATCACTT 429
||||..||||.||..||||.|||||.||.||.||||||.||.|.||.||.
BPUM_2272___y 380 CGATCATTGACGGTGAAGGTAATGCTGCCGATCAAAAATCTGAGTCTCTA 429
BSNT_03783___ 430 TGGCTGGCAGAGATGGAAGATGCCGCAGTGAAAAATA---ACCGCGATCC 476
|||||.||.||.|||...|||||.|| .||||||.| | ||.|||||
BPUM_2272___y 430 TGGCTTGCTGAAATGAGCGATGCTGC--CGAAAAACAGGGA-CGTGATCC 476
BSNT_03783___ 477 AAAATATGCGCTCGCAATGGCTGACCCAGATATAGATGCCAAGGAAGTCG 526
.|||||||||||.||.||||||||.|||||.||||||||.||.||.|.||
BPUM_2272___y 477 GAAATATGCGCTTGCGATGGCTGATCCAGACATAGATGCGAAAGATGCCG 526
BSNT_03783___ 527 GCGCGCCTAAGGGAGATCTGCTGACACTTAACGCAGA-CAAG-GCAACTG 574
|.||.||.||.|||||.|||||.||..||||..|.|| |.|| || .|.
BPUM_2272___y 527 GTGCACCAAAAGGAGAACTGCTCACCTTTAATACGGATCGAGCGC--TTC 574
BSNT_03783___ 575 AGGTAGGCTATTCAGAAGGCACTGCTGACAATTTGTCCACGCTCGTAAAG 624
|..|.||.||..|||||||....||..|.||||| ||
BPUM_2272___y 575 AATTCGGTTACGCAGAAGGTGAAGCGAAAAATTT--------------AG 610
BSNT_03783___ 625 AAG-CTTGGGTTCGAAAAAGCGCAGATCAGCTACGCAAA----------- 662
|.| ||| |.|||.|||| |.|| ||.|| |||||
BPUM_2272___y 611 ATGACTT-GCTTCAAAAA----CTGA--AGTTA-GCAAATGCTTCAGTTC 652
BSNT_03783___ 663 --------GGAG--AGCTTTGCGGAAAAGACAGCAAGGTGGCTGACGAAT 702
|.|| ||||||||.||||||...||..|.|..||.|||.||
BPUM_2272___y 653 AATATGATGAAGTAAGCTTTGCTGAAAAGGTTGCGCGCTTTCTTACGCAT 702
BSNT_03783___ 703 CCGGTCATTGTCCCTATTCTGCTGACAATCGCTTTT-------------T 739
|| .||.||| |||| ||||| ||||| |
BPUM_2272___y 703 CC---AATCGTC---ATTC------CAATC-CTTTTATCCATTGCAAGCT 739
BSNT_03783___ 740 TAGGTCTGACGGTGGAGCTTTTTTC-CCCGGGTGTCGGCCTCCCTGGAAC 788
||||..|.|..||.||.||.|.||| |||||.| ||||..|.||.||.||
BPUM_2272___y 740 TAGGGTTAATCGTTGAACTCTATTCACCCGGAT-TCGGTGTTCCAGGCAC 788
BSNT_03783___ 789 GGCTGGACTCATTGCG-TTATTGCTGTTCTTCTACGGGCATCTCGCAGCA 837
....|||.|.|..||| ||.|| ||.|||||.||.||.|||||||..|||
BPUM_2272___y 789 CATGGGAGTGACAGCGCTTCTT-CTATTCTTTTATGGTCATCTCGTGGCA 837
BSNT_03783___ 838 GGCCTTGCCGGGTATGAGACGGTTCTCCTCTTTATAGCAGGGGTGATT-C 886
|||.||||.||.|||||||||.|..||||.|||.||||| ||||.||| |
BPUM_2272___y 838 GGCTTTGCAGGATATGAGACGTTGTTCCTGTTTTTAGCA-GGGTTATTGC 886
BSNT_03783___ 887 TCATTCTGCTTGAGATTTTTCTTCCCGG----------AGGAATCATTGG 926
||.|..|.||.|| |||.||.||.|||| |||..|||||||
BPUM_2272___y 887 TCTTAATCCTGGA-ATTGTTTTTGCCGGGGGGAATCGTAGGTGTCATTGG 935
BSNT_03783___ 927 ATTACTGGGCTTAGGAGCGATTATTGCGAGCCTGTTTTTAGCCGCGGGGA 976
||||..||..| |..|||..|||.|.||||||||.||.||.|
BPUM_2272___y 936 ---ACTGATCTGTG------TGGTTGTCAGCTTATTTTTAGCAGCTGGAA 976
BSNT_03783___ 977 GCTTCACTGTCATGGCGGTTTCTCTCTTGATCGCCTCAGCTGTTTCGATT 1026
||||.||.|..||||||.||||..|||||||.|||.|.||||||||.||.
BPUM_2272___y 977 GCTTTACAGAAATGGCGATTTCCATCTTGATTGCCACTGCTGTTTCAATC 1026
BSNT_03783___ 1027 ACAGCTTTTATTTTACTGACAAGGGTGTTGGGAAAGCGTATGAAATTCTT 1076
|.|||..||||.|||.||||||.|||||||||.||.|||||||||||.||
BPUM_2272___y 1027 ATAGCAGTTATATTATTGACAAAGGTGTTGGGGAAACGTATGAAATTTTT 1076
BSNT_03783___ 1077 TAAGAAATTGATATTAAATGATTCTACAAACACGGAGAGCGGCTACGTTT 1126
|||.|||||.||.||||..|||||.||.||.|..||.|||||.||.||.|
BPUM_2272___y 1077 TAAAAAATTCATTTTAACCGATTCAACCAATAAAGAAAGCGGTTATGTCT 1126
BSNT_03783___ 1127 CAAATCAAACGCGCACGGA-CTTAATGGGAAAAG-TGGGTATAACCTTTA 1174
|||||.||||..|...||| |||..||| |.|| |.|.|.|.||.||.|
BPUM_2272___y 1127 CAAATGAAACAAGAGAGGATCTTGTTGG--ACAGATCGCTGTTACATTAA 1174
BSNT_03783___ 1175 CACCGCTGCGTCCTTCCGGTACCG-TGATTATT--GATGATGAACGCCTT 1221
||.||||.||.||.||.||.||.| || ||.| || |||||||||.||
BPUM_2272___y 1175 CAGCGCTTCGCCCATCTGGGACGGCTG--TACTCGGA-GATGAACGCATT 1221
BSNT_03783___ 1222 GACGTTGTTTCGGAGGGATCGTTTACAGAAAAAGATAAAAAAGTAAAAGT 1271
||.|||||.||.||.||..||||||..||.||.|||.||.|.||.|||.|
BPUM_2272___y 1222 GATGTTGTATCAGAAGGTGCGTTTATTGACAAGGATGAACAGGTTAAAAT 1271
BSNT_03783___ 1272 GATTAAAGTAGAAGGCTCACGCATTGTCGTGAGAGAAATTTAA- 1314
..|.||||..||||||||||||||||||||||| ||||.|..|
BPUM_2272___y 1272 CGTCAAAGCGGAAGGCTCACGCATTGTCGTGAG-GAAAGTATAG 1314
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.