Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03776 and BPUM_2265
See
Amino acid alignment /
Visit
BSNT_03776 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:19
# Commandline: needle
# -asequence dna-align/BSNT_03776___yqfF.1.24716.seq
# -bsequence dna-align/BPUM_2265___yqfF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03776___yqfF-BPUM_2265___yqfF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03776___yqfF-BPUM_2265___yqfF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03776___yqfF
# 2: BPUM_2265___yqfF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2265
# Identity: 1544/2265 (68.2%)
# Similarity: 1544/2265 (68.2%)
# Gaps: 201/2265 ( 8.9%)
# Score: 5024.0
#
#
#=======================================
BSNT_03776___ 1 ---------------------------------GT------GTTGAAAAA 11
|| .||||.|||
BPUM_2265___y 1 TTGTTTCGATCGTGGTTTAAAGTAAAAAAGGAGGTACTTTCCTTGAGAAA 50
BSNT_03776___ 12 G-------AAGGC--TAAGACCAAAAG-CAGC--TCAAAAAAATGGA--- 46
| |||.| ||||...||||| |.|| ||.|||||| ||
BPUM_2265___y 51 GAATCAGAAAGACAGTAAGCGTAAAAGACTGCTGTCTAAAAAA--GAACC 98
BSNT_03776___ 47 GCAGTTTTAAAAAT-GCCCGCTCCATGC-------ATGTACTGCTGTATC 88
.||| ||||| |..|||| ||.|| ||||..||||.||
BPUM_2265___y 99 TCAG-----AAAATGGAGCGCT-CACGCTATTTAAATGTTTTGCTATA-- 140
BSNT_03776___ 89 TTCTGCTG-----GCTACCATTATGTTTGCTTTGCTCTTTATACATGTTA 133
.|||| ||..|||||.|.||.|...|||||||..|.|||||.|
BPUM_2265___y 141 ---CGCTGGTTTAGCAGCCATTCTATTCGTGGTGCTCTTCTTCCATGTAA 187
BSNT_03776___ 134 AGCCGGAAACACTTGATTTAGACCTGTTTTCAGTTAGCGACAAGACCATT 183
||||.|||.|.||.||.|||||..|.|||||.||.|||||..|||||||.
BPUM_2265___y 188 AGCCTGAATCGCTCGACTTAGATTTATTTTCGGTGAGCGAACAGACCATC 237
BSNT_03776___ 184 TACGCTCCGGCAACCGTAGAAGATCAAAAAGCCACAGAGGAAAAAAAGCA 233
||..||||..|||||||.||.||||||.||||.|||||.|||||.||.||
BPUM_2265___y 238 TATTCTCCATCAACCGTCGATGATCAAGAAGCGACAGAAGAAAAGAAACA 287
BSNT_03776___ 234 AGCCGCTGAGGACGCGGTTGAAGATCAATATACATTAAAAAAAGAATATA 283
||..||....||....||.||.||||||||||||.|.|||||||..|||.
BPUM_2265___y 288 AGAAGCAACAGATCAAGTAGAGGATCAATATACACTCAAAAAAGCGTATT 337
BSNT_03776___ 284 CAGACAATCGGATTGACCTTGTGTCATCAATATTCGACAG-TATTAGTGA 332
|.||||||||..||||.||..|.||.||..|.||||| || |||.|..||
BPUM_2265___y 338 CTGACAATCGAGTTGATCTCATCTCCTCCCTTTTCGA-AGCTATAAAAGA 386
BSNT_03776___ 333 AGTGAAAAAATCATCAGAAGAAGGCAGTAAAT-CACCATCGGAAAAATCA 381
||.|||||||.||.|.||.||| ..||..||| |.||||||||.|||..|
BPUM_2265___y 387 AGAGAAAAAAGCAGCTGATGAA-AAAGAGAATCCGCCATCGGATAAAGAA 435
BSNT_03776___ 382 ATGGTCAAATCTGTAAAGGACAAATTGACATCAGATGTGAATGATTCTAT 431
||||||||...|||.||.||.|||.||||.||||||.||.|.||..||.|
BPUM_2265___y 436 ATGGTCAAGCGTGTGAAAGAAAAACTGACCTCAGATATGCAGGAGGCTGT 485
BSNT_03776___ 432 ATCGGAGGATTCCATCAAGACATTGCTGAAAGCAGACAGTGAAGA----C 477
.||.||..|.||||||||..|..||||..||||| |||||.|| |
BPUM_2265___y 486 TTCAGACCAATCCATCAAAGCGCTGCTTCAAGCA---AGTGACGAAAATC 532
BSNT_03776___ 478 TTTTCTTTT-GTCAGAGATACGGTCATTACCGCGGTAAATACGGTCATGA 526
|.|||||| .|.|| |||.|..||||.||.|.|||.|||.|..|.||||
BPUM_2265___y 533 -TCTCTTTTACTAAG-GATTCTATCATCACAGTGGTGAATTCACTGATGA 580
BSNT_03776___ 527 GCAGTGAAATCCCCTCGGATAAACTATCTGATGCAA----AGGATA---A 569
|.|..||||||.|..|.|..||| .||||| ||.|.| |
BPUM_2265___y 581 GTAAAGAAATCACAGCAGCGAAA-------TTGCAAGAAGAGAAAAAACA 623
BSNT_03776___ 570 GGTAGAAAA-AGAGCTAAAGAGCAATTCTATTCCGTCTAAATACTTGGGA 618
.|| ||||| ||||||..|.|.|||.||.|||||.||.||||||||....
BPUM_2265___y 624 AGT-GAAAACAGAGCTTGAAAACAACTCAATTCCATCAAAATACTTAAAT 672
BSNT_03776___ 619 GCCGCGACAGAAATCGGGCGTTTTGCTATTATTCCGAATTACGTCTTCGA 668
||.||||.|||||||||....|||||.||.|||||.||.||.||.||.||
BPUM_2265___y 673 GCTGCGAAAGAAATCGGTGAATTTGCGATCATTCCAAACTATGTATTTGA 722
BSNT_03776___ 669 TCCGAAAGCAACAGAGGCAAAACGGCAGGAAGCCTCAGATAATGTCCAGC 718
|||....|||||||||...|||.|.||.||||||.|.||||||.|.||||
BPUM_2265___y 723 TCCAGTGGCAACAGAGAAGAAAAGACAAGAAGCCGCTGATAATATTCAGC 772
BSNT_03776___ 719 AGGTTCAAATCAAACAGGGACAAGTGCTCGTGGAAGAAAATGACCTCATT 768
.||||||.||.||.||.||.|||.|..|.||.||||||...||.||.||.
BPUM_2265___y 773 CGGTTCAGATTAAGCAAGGGCAAATCTTAGTCGAAGAAGGAGAGCTTATC 822
BSNT_03776___ 769 GATCGGGAAGTGTACAGAAAACTTGAGCTGACCGGGTTATTAAATAACTC 818
||.||.||||||||..|.|||.|.||.|||||.|||.|.|||||.|.|||
BPUM_2265___y 823 GACCGAGAAGTGTATCGTAAATTAGAACTGACAGGGCTCTTAAACAGCTC 872
BSNT_03776___ 819 AAATCTCTTTAAACCGATCAGCGGGCTATTGATTATGATCGGACTTTTCA 868
.|||.|..||||.||..|.|||||.||..||||..||||.|||||.||..
BPUM_2265___y 873 CAATTTGATTAAGCCTGTAAGCGGTCTTATGATCTTGATTGGACTGTTTT 922
BSNT_03776___ 869 TTGCAACACTTGTATATTATT-------TTGAAAAAC-AGAAACAAAATC 910
|.|||.| .|||||| ||| ||.| ||.|| ||||||
BPUM_2265___y 923 TAGCAGC-------GATTATTCATTCACTTG--AATCGAGGAA-AAAATC 962
BSNT_03776___ 911 TGAAGTT--TAAAAACCAATCCATTCT--GTTATTCTC-CATAATCACAA 955
....||| |||.||..|.||..|.|| ..|||||.| |||..||||.|
BPUM_2265___y 963 GCTTGTTCATAAGAATAAGTCGTTGCTACTCTATTCGCTCATTTTCACGA 1012
BSNT_03776___ 956 CACTTTTGCTTGTGATCATGGAGGTTGTCAGTTTGTTTCAGAAGATGGAG 1005
||.|..|.||.||||||||.||..|||||.|.||.|||.|.|.|.|.
BPUM_2265___y 1013 ---TTATTTTAGTCATCATGGAAGTATTCAGTCTCTTCCAGGAAACGAAA 1059
BSNT_03776___ 1006 TATA--ATAATATCGGCTATCTGGTCCCCATTGCGGCCGGCGCCATCTTA 1053
|||| |.|||| ||.|||.||||.||..|.||....|||.|.||..|.
BPUM_2265___y 1060 TATACGACAATA--GGATATGTGGTGCCAGTGGCACTTGGCACAATGCTG 1107
BSNT_03776___ 1054 ATCAAACTGCTGATGAATGAACGCATTGCCATTTT-----GGGAAGTATC 1098
|||||.|||||.||.|||||.||..|.||.||||| |...|||||
BPUM_2265___y 1108 ATCAAGCTGCTTATCAATGAGCGGCTAGCGATTTTCTCTGGTCTAGTAT- 1156
BSNT_03776___ 1099 ATTCTTGCGATTTGCGGAAGTATGATGTTTAATCAGGGTGTGACAGGAAC 1148
||||..|||||||.|||||||||||||||||.|||||.||.||...
BPUM_2265___y 1157 ----TTGCTCTTTGCGGCAGTATGATGTTTAATCAAGGTGTAACCGGCGT 1202
BSNT_03776___ 1149 ATTCAATTATGTCATAGGGATTTATTA-TTTGATCAGCGGCATTTCAGGT 1197
.||.||.|||||.||..|...|||||| .||| |.|||||.||..|.||.
BPUM_2265___y 1203 CTTTAACTATGTGATCTGCGCTTATTACCTTG-TGAGCGGGATGGCGGGC 1251
BSNT_03776___ 1198 GTATTATTTTTAGGAAAACACAATGCAAGATCAAAGATTTTGCAGACCGG 1247
.|.||||||||..||||.||.||||||.|.|||||.||.||.|||.|.||
BPUM_2265___y 1252 ATTTTATTTTTGAGAAAGCATAATGCACGTTCAAAAATATTACAGGCAGG 1301
BSNT_03776___ 1248 ACTTTTCGTGGCGTTTATTAATATGGTTGTCGTTCTATCCTTATTA--TT 1295
.||||..||.||.||..|.|||.|..||||.||||||||| |||| .|
BPUM_2265___y 1302 GCTTTGGGTCGCTTTGGTGAATGTCCTTGTGGTTCTATCC--ATTACGCT 1349
BSNT_03776___ 1296 GATCCAGAACACTGCGCTGTCGGGTCTTGAAATCGG----CACGTTAATG 1341
.|||||.|||.|..|.|..||.||.||||||||||| .||.|||
BPUM_2265___y 1350 CATCCAAAACTCCTCACCATCAGGGCTTGAAATCGGTGTAAACCTTA--- 1396
BSNT_03776___ 1342 CTCATGGGGGTTGTGTCGGGGTTTGCTTCATCTGTATTGATCATCGGCCT 1391
|.||||...|||||||.||||||||.||||||.|.|||.||||.||.||
BPUM_2265___y 1397 -TGATGGCAATTGTGTCAGGGTTTGCATCATCTATTTTGGTCATTGGGCT 1445
BSNT_03776___ 1392 GATGCCGTTTTTTGAGACGGGCTTTGGCATTTTATCCACCATGAGGCTGC 1441
.|||||..|.|||||||.....|||||||||.|.||.||.||||.||||.
BPUM_2265___y 1446 AATGCCTGTGTTTGAGAGTATGTTTGGCATTCTTTCAACAATGAAGCTGA 1495
BSNT_03776___ 1442 TCGAGCTGTCTAATCCTAACCATCCGCTATTGCGCAAA---ATACTGACA 1488
|.||.||.||.||.||.||.||||||| |||..||| ||..|.|||
BPUM_2265___y 1496 TTGAACTATCAAACCCAAATCATCCGC---TGCTTAAAAAGATTTTAACA 1542
BSNT_03776___ 1489 GAAACACCAGGTACATATCATCACAGTGTAATGGTTGCCAATTTATCAGA 1538
||.||||||||||||||||||||.|||||.|||||.||.||||||.|.||
BPUM_2265___y 1543 GAGACACCAGGTACATATCATCATAGTGTCATGGTGGCAAATTTAGCGGA 1592
BSNT_03776___ 1539 GGCAGCCTGTGAAGCGGTTGGGGCTAATGGTTTGCTTGCAAGAGTCGGCG 1588
.||.||.||||||||.||.||.||.||.|||.|..|.|||||.||.||||
BPUM_2265___y 1593 TGCGGCATGTGAAGCAGTCGGAGCAAACGGTCTTTTAGCAAGGGTTGGCG 1642
BSNT_03776___ 1589 CATATTATCACGATCTCGGAAAAACAAAGCGCCCGCAATATTTTATTGAA 1638
|.||||||||.||..|.||.|||||.||..|.||.|||||.|||||.|||
BPUM_2265___y 1643 CTTATTATCATGACATTGGCAAAACGAAAAGACCCCAATACTTTATCGAA 1692
BSNT_03776___ 1639 AACCAAATGAATATTGACAATCCGCATGACAAGCTGTCACCTCAGTTGAG 1688
|||||||||||.|||||.|||||||||||||||||.||.||||||||.||
BPUM_2265___y 1693 AACCAAATGAACATTGATAATCCGCATGACAAGCTTTCCCCTCAGTTAAG 1742
BSNT_03776___ 1689 TAAAAATATTATTATCTCGCATACGACAGACGGTGCGAATATGCTGAG-- 1736
|||||||||.|||||..|.|||||||||||.||.||..||||||||||
BPUM_2265___y 1743 TAAAAATATCATTATTGCTCATACGACAGATGGAGCTGATATGCTGAGAG 1792
BSNT_03776___ 1737 --AAGCTATAAATTTCCGAAAGAGCTTGTCGATATTGCTGAGCAGCATCA 1784
||| ||.|||||..|||||||||||||||||||.||.||||||||
BPUM_2265___y 1793 AAAAG----AAGTTTCCTGAAGAGCTTGTCGATATTGCCGAACAGCATCA 1838
BSNT_03776___ 1785 TGGAACCTCGCTTTTAAAGTTTTTTTACTATAAAGCGAAGGAAAAAG-GC 1833
.||.|..||.||.||||||||.||||||||| ||||.||||| ||
BPUM_2265___y 1839 CGGGAAGTCACTGTTAAAGTTCTTTTACTAT------AAGGCAAAAGAGC 1882
BSNT_03776___ 1834 -----GACCAGATTACAGAGGAAGAGTTCCGTTATCCGGGGCCGAAGCCG 1878
||.|||.|.|||||.|||||.|||||||||||.||.||.||.|||
BPUM_2265___y 1883 GTGATGATCAGGTGACAGAAGAAGAATTCCGTTATCCTGGTCCAAAACCG 1932
BSNT_03776___ 1879 CAGTCAAAGGAAGCCGCAATTATATCAGTGGCCGACAGTGTTGAAGCGGC 1928
||.|||||.|||||.||||||||.||.||.||.||.||.||.|||||.||
BPUM_2265___y 1933 CAATCAAAAGAAGCGGCAATTATTTCTGTAGCGGATAGCGTGGAAGCAGC 1982
BSNT_03776___ 1929 CGTCAGATCCATGCACAATCCAAATCCTGAACGAATTGAAAAGCTTGTCC 1978
.||..||||.|||||.|||||||||||.|||||.||.||||||||.|||.
BPUM_2265___y 1983 GGTACGATCGATGCATAATCCAAATCCAGAACGGATCGAAAAGCTCGTCA 2032
BSNT_03776___ 1979 GGGGTATTATATCCGATAAGCTTCAGGACGGACAGTTCAGTGAATGCGAT 2028
..||.|||||.||||||||..|.|||||.||.||.|||||||||||.|||
BPUM_2265___y 2033 AAGGCATTATTTCCGATAAAATGCAGGATGGGCAATTCAGTGAATGTGAT 2082
BSNT_03776___ 2029 CTGACATTTAAAGAGCTGGATA----CAATCGCAAAAACGCTCTGTGCAA 2074
|||||||||||||||.|..||| .|.|| |||||.|.|||.|||
BPUM_2265___y 2083 CTGACATTTAAAGAGTTAAATATTATTAGTC----AAACGATTTGTACAA 2128
BSNT_03776___ 2075 CATTAAAAGGAATTTTCCACTCCCGGATTGAATATCCGGAGGCTACTA-- 2122
|||||||.||.||||||||.||.|||||||||||||||||.||..|.|
BPUM_2265___y 2129 CATTAAAGGGGATTTTCCATTCTCGGATTGAATATCCGGATGCCCCGAAG 2178
BSNT_03776___ 2123 -AGAAGGTGAAATAG 2136
||||||||||.||.
BPUM_2265___y 2179 CAGAAGGTGAAGTAA 2193
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.