Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03741 and BPUM_2237
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:16
# Commandline: needle
# -asequence dna-align/BSNT_03741___yqfW.1.24716.seq
# -bsequence dna-align/BPUM_2237___yqfW.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03741___yqfW-BPUM_2237___yqfW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03741___yqfW-BPUM_2237___yqfW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03741___yqfW
# 2: BPUM_2237___yqfW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 592
# Identity: 425/592 (71.8%)
# Similarity: 425/592 (71.8%)
# Gaps: 23/592 ( 3.9%)
# Score: 1435.0
#
#
#=======================================
BSNT_03741___ 1 ATGTTACGCTTAGGAATAGATATTGACGGCACAATCACGGCTCAGGATAC 50
||||||||.||||||||.||||||||.||||||.|.|||||.|||||.||
BPUM_2237___y 1 ATGTTACGTTTAGGAATTGATATTGATGGCACAGTGACGGCGCAGGACAC 50
BSNT_03741___ 51 ATTCGTCCCTTATTTGAACCGTTCGTT-TAATCTTTCCATTTCATTAAAC 99
.||.||.||.|||||.||....||||| .||| .|.||||..||.||.|.
BPUM_2237___y 51 CTTTGTTCCCTATTTAAATGAGTCGTTCCAAT-GTGCCATGACACTAGAA 99
BSNT_03741___ 100 GATATGACGGATTATGATTTAACAAAGCTGTTAAACATTACCCAGGAAGA 149
||||||||.||.||||||||.||.|||||.|||||.|||.|.||.|||||
BPUM_2237___y 100 GATATGACAGAATATGATTTGACGAAGCTTTTAAATATTTCACATGAAGA 149
BSNT_03741___ 150 ATTTTGGGATTGGATGAATCAAAATGAAGCGATCATATATAAGGAAGCAT 199
.|||||||..|||||||||||..||||..|..|.||||||||..|.|||.
BPUM_2237___y 150 GTTTTGGGGCTGGATGAATCAGCATGAGCCTCTTATATATAAACAGGCAA 199
BSNT_03741___ 200 TGCTTGCACAGCATGCGAAACAGTCACTTGATCTTCTCAAAGAGGAGCAC 249
.||.|||..||.|.||.|||.||...|||||||...|.|||.|..|||||
BPUM_2237___y 200 AGCCTGCTAAGGACGCAAAAGAGATTCTTGATCAAATGAAACATCAGCAC 249
BSNT_03741___ 250 AAGCTTATTTATATTACAGCGAGACGGAC----TCATTTAACTGATATTA 295
|.|||.||.|||||||||||.|||.|| | |||| .|.|||||.|
BPUM_2237___y 250 AGGCTGATCTATATTACAGCAAGAAGG-CAGCATCAT---GCGGATATCA 295
BSNT_03741___ 296 CCTATGAATGGTTTGACAGACAAAACATTCATTATGACCACATCGAACTC 345
|||||||.|||||..|||.|||..||.|.||.|||||..||||.||.||.
BPUM_2237___y 296 CCTATGAGTGGTTCCACAAACATCACGTGCACTATGATGACATTGAGCTG 345
BSNT_03741___ 346 GTTGGCGGTCATCACAAAGTTGAAGCGGTCAAGAATCATAACATCGACCT 395
||||||||||||||.||..|.|||||.|||.||||.||..|.||.||..|
BPUM_2237___y 346 GTTGGCGGTCATCATAAGCTCGAAGCTGTCCAGAAGCACGAGATTGATGT 395
BSNT_03741___ 396 GTTTTTTGAGGATCATCACGGGAACGCCATGATGATTGCGAAAGAAGCCG 445
||||||.||.||||||||.|||||.||||..||||||||.|||||.||.|
BPUM_2237___y 396 GTTTTTCGAAGATCATCATGGGAATGCCACAATGATTGCAAAAGAGGCTG 445
BSNT_03741___ 446 GGATACCGGTGATTTTGTTCAATTCCCCTTATAATCAGCTTCCGATTGAT 495
..||.|||||.|||.|.||.||.|||||.||||||||..|.||.||||||
BPUM_2237___y 446 ACATCCCGGTTATTCTTTTTAACTCCCCATATAATCAAATGCCCATTGAT 495
BSNT_03741___ 496 TCAAACATCATCAGAGTAAACAACTGGCTAGAAGCCGTTCAATGGATGAA 545
...|..||.||..|.||.||||||||||..|||||...|||||||||.|
BPUM_2237___y 496 GACAGGATTATACGCGTCAACAACTGGCAGGAAGCATCTCAATGGATCA- 544
BSNT_03741___ 546 CAACA--ACAAGCATCACTT--AATAC-GCGTCAATAACTGA 582
|||| ||.||||.|..|| || || || |.|.|||
BPUM_2237___y 545 -AACAATACGAGCAGCGTTTGGAA-ACTGC-TTATTAA---- 579
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