Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03485 and BPUM_2073
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:00
# Commandline: needle
# -asequence dna-align/BSNT_03485___spoVAC.1.24716.seq
# -bsequence dna-align/BPUM_2073___spoVAC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03485___spoVAC-BPUM_2073___spoVAC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03485___spoVAC-BPUM_2073___spoVAC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03485___spoVAC
# 2: BPUM_2073___spoVAC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 453
# Identity: 329/453 (72.6%)
# Similarity: 329/453 (72.6%)
# Gaps: 0/453 ( 0.0%)
# Score: 1149.0
#
#
#=======================================
BSNT_03485___ 1 ATGACAAACATAAAAGAAAATTACAAATCAAAAGTGAAAACATATCAGCC 50
.||.|.|...|||||||.||.||...|||.||.||||||||.||||||||
BPUM_2073___s 1 GTGTCGAGTTTAAAAGAGAACTATCCATCTAAGGTGAAAACGTATCAGCC 50
BSNT_03485___ 51 TAAGCCGCCTTACGTCTGGAACTGTGTAAAAGCCTTTTTAGTGGGCGGAC 100
|||.||.|||||.|||...|||||..|.||.||.|||.|.||.||.|||.
BPUM_2073___s 51 TAAACCTCCTTATGTCCTCAACTGCATCAAGGCTTTTCTTGTTGGTGGAT 100
BSNT_03485___ 101 TGATTTGTGCAATCGGGCAAGGTCTGCAAAATTTTTATATCCATTTTTTT 150
||||.|||||.||.||..|.||.|||||||||||.|||||.||.||||||
BPUM_2073___s 101 TGATCTGTGCCATAGGCGAGGGACTGCAAAATTTCTATATTCACTTTTTT 150
BSNT_03485___ 151 GATTTCAATGAAAAAACTGCGGGGAATCCAACAGCTGCAACGCTGATATT 200
|||||.|||||||||||.||.|||||.|||||||..||.||.||.||.||
BPUM_2073___s 151 GATTTTAATGAAAAAACAGCAGGGAACCCAACAGTGGCGACCCTCATTTT 200
BSNT_03485___ 201 AATTTCTGCCCTGCTTACAGGGTTTGGCATCTATGACAGAATCGGACAAT 250
|||||||.|..|..|.||.||..|.||.||.||.||..|||||||.||.|
BPUM_2073___s 201 AATTTCTTCTATATTAACTGGTATCGGTATTTACGATCGAATCGGTCAGT 250
BSNT_03485___ 251 TCGCAGGCGCAGGTTCAGCCGTACCTGTCACAGGTTTTGCCAACAGTATG 300
|.||.||.||.||.||.||.||.||.||.|||||.|||||.|||||||||
BPUM_2073___s 251 TTGCTGGAGCGGGATCGGCTGTTCCGGTGACAGGATTTGCTAACAGTATG 300
BSNT_03485___ 301 GCAAGCGCGGCTCTTGAATATAAAAGCGAAGGATTAGTGCTTGGAGTAGC 350
.|||||||.||.|||||..|||||||.|||||..|.||..|.||.||.||
BPUM_2073___s 301 ACAAGCGCTGCCCTTGAGCATAAAAGTGAAGGGCTTGTTTTAGGGGTCGC 350
BSNT_03485___ 351 GACAAATATGTTTAAACTGGCAGGAAATGTTATTGTTTTCGGAGTTGTAG 400
.||.||||||||||||||.||.||.||.||.|||||.||.||.||.||..
BPUM_2073___s 351 CACCAATATGTTTAAACTCGCTGGGAACGTCATTGTATTTGGTGTCGTCT 400
BSNT_03485___ 401 CTGCATACATCGTTGGAATGATTCGGTTTGCTTTTGAGAAACTGATGTCA 450
|.|||||..||||.||.||.|||||.|.....|||||.||..||.|.||.
BPUM_2073___s 401 CGGCATATGTCGTAGGGATCATTCGATACATCTTTGAAAAGATGTTTTCG 450
BSNT_03485___ 451 TAG 453
|||
BPUM_2073___s 451 TAG 453
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