Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03167 and BPUM_1869
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:40
# Commandline: needle
# -asequence dna-align/BSNT_03167.1.24716.seq
# -bsequence dna-align/BPUM_1869.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03167-BPUM_1869.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03167-BPUM_1869.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03167
# 2: BPUM_1869
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 673
# Identity: 520/673 (77.3%)
# Similarity: 520/673 (77.3%)
# Gaps: 14/673 ( 2.1%)
# Score: 1970.5
#
#
#=======================================
BSNT_03167 1 ATGAAAGAACATGTACTAGTAATCCTGCCTCACCCTGATGATGAATCATA 50
|||||.||||||||||||||.||.|||||||||||.|||||||||||.|.
BPUM_1869 1 ATGAATGAACATGTACTAGTGATGCTGCCTCACCCAGATGATGAATCGTT 50
BSNT_03167 51 TGGAGTGGCAGGCCTCATTGCCTTAAACAGAAAAAAAGACATTCCCGTTA 100
|||.||.|||||.||||||||...||.|||||||...|.|||.||.||.|
BPUM_1869 51 TGGGGTTGCAGGTCTCATTGCACAAAGCAGAAAACGCGGCATCCCAGTCA 100
BSNT_03167 101 CGTATGCCTGC--GCCACTTTAGGTGAAATGGGCAGAAATATGGGCGATC 148
|||||||.||| |.||||| ||.||||||||.|||||||||||| |.|
BPUM_1869 101 CGTATGCATGCGGGACACTT--GGGGAAATGGGTAGAAATATGGGC-AGC 147
BSNT_03167 149 ----CATTTTTCGCGAATCGGGAAACGTTGCCGCTGCTAAGAAAACAAGA 194
|||.| ||.|||||||||||..|.||...|.||||||||||.||
BPUM_1869 148 CCAACATAT---GCCAATCGGGAAACACTTCCTGAGTTAAGAAAACAGGA 194
BSNT_03167 195 GCTCATCAATGCTTGCAAAGAAATGGATATCAATGACCTTCGTATGCTTG 244
..|.||||||||.|||||||||||||||||||.||||.|.||||||||||
BPUM_1869 195 ATTAATCAATGCCTGCAAAGAAATGGATATCACTGACTTACGTATGCTTG 244
BSNT_03167 245 GACTCCGTGACAAAACGCTCGAATTTGAAGACGATGAGTATTTAGCTGAT 294
|.||.||.||.||||||.|.||||||||.|||||.|||||||||||||||
BPUM_1869 245 GTCTTCGCGATAAAACGTTGGAATTTGAGGACGACGAGTATTTAGCTGAT 294
BSNT_03167 295 ATCATGGAAGAGATCATAGATGATGTAAAACCAAGTTTAATTGTCACATT 344
.|.||||||...|||||.|||||.||.|||||.|...|.||||||||.||
BPUM_1869 295 GTGATGGAAACCATCATTGATGAAGTCAAACCTACACTGATTGTCACGTT 344
BSNT_03167 345 TTATCCCGGACACGGTGTGCACCCTGACCATGATGCATGCGGGGAAGCGG 394
||||||.|||||.|||||.||||||||.||||||||....||||||||.|
BPUM_1869 345 TTATCCTGGACATGGTGTACACCCTGATCATGATGCGACAGGGGAAGCAG 394
BSNT_03167 395 TTATCCGTGCATTATATCGCAAAAAGAAAGAAGACCGTCCGCGT-ACAAT 443
|.|||||.||..|.||.||.||.||.||||||||.||||| .|| |||..
BPUM_1869 395 TAATCCGCGCTCTTTACCGTAAGAAAAAAGAAGATCGTCC-TGTCACATA 443
BSNT_03167 444 CTGCATGGCCATTACCCGCAACAGAGAAGAGGTTCTCGGCGAAGCTGATG 493
|||||||||.|||||....||.||||||||.||.|||||..|.||.|||.
BPUM_1869 444 CTGCATGGCGATTACGAAAAATAGAGAAGAAGTGCTCGGAAATGCAGATA 493
BSNT_03167 494 TCGTGCTTGATATCAAAGAAGTAGCTGATATTAAAATGAATGCGTTAAGA 543
|...|.|.||.||.|.|||.|||||.|||||.|||.|.|||||.||||||
BPUM_1869 494 TTACGATCGACATTACAGATGTAGCAGATATCAAATTAAATGCTTTAAGA 543
BSNT_03167 544 GCTCACCGCACACAAACAGAAGGCATGCTCAGAGAGCTTGAAGAGAAATT 593
||.||..|.||.|||||||||||||||||.||||||||||||.|.||..|
BPUM_1869 544 GCACATAGAACGCAAACAGAAGGCATGCTGAGAGAGCTTGAACAAAAGCT 593
BSNT_03167 594 GAAAAATAATGAACCTGTTATGGCAACATGGTTTGAAGAAGAAATATATT 643
.|||||.||.|||||||||.|...||.||||||.||.||||||||.|..|
BPUM_1869 594 AAAAAACAAAGAACCTGTTGTCCAAAAATGGTTCGATGAAGAAATCTTCT 643
BSNT_03167 644 GGACGTATCAATGGAATGATTAA 666
||||.||.|||||||||||.|||
BPUM_1869 644 GGACATACCAATGGAATGACTAA 666
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