Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02981 and BPUM_1702

See Amino acid alignment / Visit BSNT_02981 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:30
# Commandline: needle
#    -asequence dna-align/BSNT_02981___sspN.1.24716.seq
#    -bsequence dna-align/BPUM_1702___sspN.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02981___sspN-BPUM_1702___sspN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02981___sspN-BPUM_1702___sspN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02981___sspN
# 2: BPUM_1702___sspN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 154
# Identity:     101/154 (65.6%)
# Similarity:   101/154 (65.6%)
# Gaps:          14/154 ( 9.1%)
# Score: 296.0
# 
#
#=======================================

BSNT_02981___      1 ---ATGGG-AAACAACAAGAAAAACGGTCAGCCTCAATATGCTCCAAGCC     46
                        ||||| |.|.|.||.||.|||    ||..|.||.|.|.|.|||..||
BPUM_1702___s      1 ATGATGGGTAGAGAGCATGATAAA----CAAGCGCAGTTTACACCAGACC     46

BSNT_02981___     47 ACTTGGGTACAAAGCCTGTAAAATATAAAGCCAATAAAGGGGAAAAAATG     96
                     |.||.||.|||||.|||||...|||.|||..|||||||||..||||.|||
BPUM_1702___s     47 ATTTAGGGACAAAACCTGTCGCATACAAACGCAATAAAGGTAAAAAGATG     96

BSNT_02981___     97 CATGATACTTCA---GGACAGCGGCCGATTATCATGCAGACAAAAGGCGA    143
                     |||.|||..|||   |.|||||  |.|| |.|.||.|||||.||.|||||
BPUM_1702___s     97 CATAATAAATCAAATGAACAGC--CTGA-TGTGATCCAGACGAAGGGCGA    143

BSNT_02981___    144 GTAG    147
                     .||.
BPUM_1702___s    144 ATAA    147


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