Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02603 and BPUM_1487
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:10
# Commandline: needle
# -asequence dna-align/BSNT_02603___ylpC.1.24716.seq
# -bsequence dna-align/BPUM_1487___ylpC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02603___ylpC-BPUM_1487___ylpC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02603___ylpC-BPUM_1487___ylpC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02603___ylpC
# 2: BPUM_1487___ylpC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 571
# Identity: 427/571 (74.8%)
# Similarity: 427/571 (74.8%)
# Gaps: 8/571 ( 1.4%)
# Score: 1549.0
#
#
#=======================================
BSNT_02603___ 1 ATGAGAAGAAATAAGAGAGAACGCCAGGAATTACTTCAGCAGACGATTCA 50
||||.|..||||||.|.||||||.||..||.|.||.|||||.||||| .
BPUM_1487___y 1 ATGAAACTAAATAAAAAAGAACGTCAAAAACTTCTCCAGCAAACGAT--C 48
BSNT_02603___ 51 AG--CAACCCCCTTTATTACAGATGAAGAATTAGCGGGTAAATTCGGGGT 98
|| ||||.||.||.|||||.|||||||||||.||...|||||||||.||
BPUM_1487___y 49 AGCTCAACTCCGTTCATTACTGATGAAGAATTGGCAACTAAATTCGGTGT 98
BSNT_02603___ 99 GAGCATCCAGACGATACGTTTGGACCGCTTAGAGCTTTCCATACCTGAAC 148
.||.||.||.|||.|.|||.|.||.||.||.||.||.||.||.||||||.
BPUM_1487___y 99 AAGTATTCAAACGGTTCGTCTAGATCGTTTGGAACTGTCAATCCCTGAAT 148
BSNT_02603___ 149 TGAGAGAAAGAATTAAGAACGTGGCAGAGAAAACACTTGAGGACGAAGTG 198
||.|.||||||||||||.|.|||||.||.||.|||.|.|||||.||||||
BPUM_1487___y 149 TGCGCGAAAGAATTAAGCATGTGGCCGAAAAGACATTAGAGGATGAAGTG 198
BSNT_02603___ 199 AAGTCTCTGTCACTTGATGAAGTTATCGGAGAAATTATTGACCTTGAGCT 248
||.||.||..||||.||||||||.||.||||||||.|||||..|.|||||
BPUM_1487___y 199 AAATCACTTCCACTGGATGAAGTGATTGGAGAAATGATTGATGTAGAGCT 248
BSNT_02603___ 249 GGATGATCAGGCGATATCCATTTTAGAAATAAAACAGGAGCACGTGTTCA 298
.|||||.||.||.||.||||||||||||.|.|.|.|.|||||.||.||.|
BPUM_1487___y 249 TGATGACCAAGCTATTTCCATTTTAGAAGTGAGAAAAGAGCATGTATTTA 298
BSNT_02603___ 299 GCCGGAATCAGATTGCGAGAGGACACCATTTATTTGCACAGGCGAATTCT 348
||||.||.||.|||||.||.|||||.|||.|.||.||.|||||.|||||.
BPUM_1487___y 299 GCCGAAACCAAATTGCAAGGGGACATCATCTCTTCGCCCAGGCAAATTCG 348
BSNT_02603___ 349 TTGGCAGTTGCAGTCATTGATGACGAGCTGGCGCTGACTGCAAGTGCAGA 398
.|.|||||.||.||||||||.||.||.|||||..|.||.||||..|||.|
BPUM_1487___y 349 CTTGCAGTAGCGGTCATTGACGATGAACTGGCTTTAACAGCAAAAGCAAA 398
BSNT_02603___ 399 CATCCGCTTTACAAGACAGGTAAAGCAGGGTGAACGTGTCGTAGCAAAAG 448
.||....||||||||.|||||.||.||.||.|||||.|||||..||||||
BPUM_1487___y 399 TATTAAATTTACAAGGCAGGTTAAACAAGGCGAACGAGTCGTCTCAAAAG 448
BSNT_02603___ 449 CGAAAGTGACGGCTGTC--GAAAAAGAAAAAGGAAGAACGGTTGTCGAAG 496
|.||||| .|.||..| ||.|||||||||||.|||||.||.||.||||
BPUM_1487___y 449 CCAAAGT--AGCCTCGCATGATAAAGAAAAAGGCAGAACTGTAGTTGAAG 496
BSNT_02603___ 497 TGAACAGCTACGTTGGCGAAGAAATTGTTTTTTCTGGACGCTTTGACATG 546
||||||||||.||.||.||||||.||||.||.||.|||..|||||.||||
BPUM_1487___y 497 TGAACAGCTATGTCGGTGAAGAAGTTGTCTTCTCAGGAGACTTTGTCATG 546
BSNT_02603___ 547 TATCGTTCAAAACATTCATAA 567
|||||.||||||||....|||
BPUM_1487___y 547 TATCGCTCAAAACAAAAGTAA 567
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