Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02566 and BPUM_1457
See
Amino acid alignment /
Visit
BSNT_02566 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:06
# Commandline: needle
# -asequence dna-align/BSNT_02566___cysP.1.24716.seq
# -bsequence dna-align/BPUM_1457___cysP.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02566___cysP-BPUM_1457___cysP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02566___cysP-BPUM_1457___cysP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02566___cysP
# 2: BPUM_1457___cysP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1137
# Identity: 761/1137 (66.9%)
# Similarity: 761/1137 (66.9%)
# Gaps: 144/1137 (12.7%)
# Score: 2406.0
#
#
#=======================================
BSNT_02566___ 1 ATGGAATTAGCCGCTATTTTATTTAGCTTGTTTTTCGCGATGAATATTGG 50
||||||.|.|||||.|||||||||||.||.|||||||||.|.||.|||||
BPUM_1457___c 1 ATGGAAATTGCCGCAATTTTATTTAGTTTATTTTTCGCGCTAAACATTGG 50
BSNT_02566___ 51 TGCAAGCGGCGCTGCAGCTTCGATGGGGGTTGCTTACGGCTCCGGAGCCA 100
.||.||.||.||.||.|||||.|||||..|.||.|||||.||.||.||.|
BPUM_1457___c 51 CGCGAGTGGTGCAGCTGCTTCAATGGGCATCGCATACGGATCAGGCGCGA 100
BSNT_02566___ 101 TCAAAAAGAAAACCTACGCTTTGATCCTATGCGCAGTCGGTGTCTTTGCC 150
|...||||...|.|||.||..|.|...||||.||.||.||..|.||.||.
BPUM_1457___c 101 TTCGAAAGCCGATCTATGCACTCAGTGTATGTGCGGTTGGGATTTTAGCA 150
BSNT_02566___ 151 GGGGCGGTCATTGGCGGAGGCGAGGTTGTAAAAACAATCAGCTCCGGCAT 200
||..|.|||||||||||.||.|||||.||.|||||.|||||.||.||.||
BPUM_1457___c 151 GGATCAGTCATTGGCGGCGGTGAGGTCGTCAAAACCATCAGTTCTGGGAT 200
BSNT_02566___ 201 TATTCCTGAGCAGACG--ATTACAC-TGACGATTGTTTGCATCATTATTG 247
|||.||||| |..|| ||||||| ||| .||||||||.||.|||||||
BPUM_1457___c 201 TATGCCTGA--ATCCGTCATTACACTTGA-AATTGTTTGTATTATTATTG 247
BSNT_02566___ 248 GAGCTGCTGCCCTGTCGCTCTTTACTGCTAATCTGCTCGGC-ATTCCTTT 296
|..|||||||..|.||.|||||||..||.|||.||.| ||| ||.|||||
BPUM_1457___c 248 GTTCTGCTGCATTATCACTCTTTATAGCGAATTTGAT-GGCGATCCCTTT 296
BSNT_02566___ 297 GTCGACAAGTGAAGTAACAGTCGGCGCGGTTGTCGGCGTGGGAGTGGCTT 346
.||.||.|||||.||.|||||.||.||.||.||.||.||.|..||.||.|
BPUM_1457___c 297 ATCAACGAGTGAGGTGACAGTAGGTGCTGTCGTTGGAGTTGCGGTAGCGT 346
BSNT_02566___ 347 ATAAAGTATTGTTTGTGAACAATC--TTCTGATCATTGTGTCATTTTGGG 394
||||||||||||.||||| |||| ||.|..||||.|||||.|||||||
BPUM_1457___c 347 ATAAAGTATTGTATGTGA--AATCCATTTTAGTCATCGTGTCCTTTTGGG 394
BSNT_02566___ 395 TTTTTGTCCCGCTGTTCGCTTTCGGCTTCA--CCTATTTCGTATCTAAGC 442
| |.||| |||||| |.
BPUM_1457___c 395 T------------------------CATCATTCCTATT----------GT 410
BSNT_02566___ 443 TGTTTCGTTATTTTAA----GATTGAAGT-AAAATCTTCTAAAAAG---- 483
||.|| ||.||||.| .||||.||| ||||||.|| |.||.|
BPUM_1457___c 411 TGCTT--TTCTTTTTACATTCATTGTAGTCAAAATCATC-AGAATGTTCC 457
BSNT_02566___ 484 ---------------CAAAAAA-------------TCCTCGGCGTTGTTT 505
||||||| |..||| .||.|||
BPUM_1457___c 458 CGAAACGAACCTTTTCAAAAAAAGGCACTTTGATTTTATCG--ATTATTT 505
BSNT_02566___ 506 TG----TTAGTTGCCGGATTTTTCGAAGCATTCTCTGCCGGCATGAATAA 551
|| ||||| ||||||.|.||||||||.|||||.||.|||||.||
BPUM_1457___c 506 TGATCATTAGT----GGATTTCTAGAAGCATTTTCTGCTGGGATGAACAA 551
BSNT_02566___ 552 CGTGGCGAATGCTGTTGG-CCCGTTAGTAGCTGCCGGTGTGCTTGA--TG 598
.||.||.||||||||.|| |||.|| ||.|||.|.||..| ||.| ||
BPUM_1457___c 552 TGTCGCCAATGCTGTAGGTCCCCTT-GTTGCTTCAGGCAT--TTTATCTG 598
BSNT_02566___ 599 TCGGAAAAGGAAC-CTTGTATGGAGGAGCTTTT-GTTGCTCTTGGCGCAC 646
|.||..||||||| ||| ||.||.|| |||||| |||||.|||||.||.|
BPUM_1457___c 599 TTGGGCAAGGAACGCTT-TACGGTGG-GCTTTTCGTTGCACTTGGTGCTC 646
BSNT_02566___ 647 TGTTATTAGGCCGGCGTGTGCTAGAAACAAACGGGAAGAAAATTACGAGA 696
|.||||||||..|..|.||.|||||||||||.||.||||||||.||..|
BPUM_1457___c 647 TTTTATTAGGAAGAAGGGTACTAGAAACAAATGGAAAGAAAATCACCCG- 695
BSNT_02566___ 697 TTCTCCAAAGGG-GAAGGCAT-TCTCTTATCCGGTACAGGAGCCGGACTG 744
.|.||.||.||| |||||.|| |..||| ||.|||||.||.||.|||||.
BPUM_1457___c 696 CTATCAAACGGGCGAAGGGATATTGCTT-TCAGGTACCGGTGCTGGACTT 744
BSNT_02566___ 745 GTGATCATCAGTTCTGTATTTGGGATGCCGGTGCC-CTTGGCGCAAGTCA 793
||.||||||||.|||.|.||||||.|.||.||.|| ||| .|.|||.|||
BPUM_1457___c 745 GTCATCATCAGCTCTATTTTTGGGCTACCTGTTCCACTT-ACCCAAATCA 793
BSNT_02566___ 794 CGTCATCGTCTATTATCGGAATAGGCATGGCAAAAAACGGTCCGAACGTG 843
|.||.||||||||.||||||.|.||||||||||||...||.||.||..|.
BPUM_1457___c 794 CCTCCTCGTCTATCATCGGACTTGGCATGGCAAAAGGTGGACCTAATATT 843
BSNT_02566___ 844 TTCCATAAACAAGTTGTTCAAACGATGCTGAAGGTATGGATCGTATCGCC 893
||.||||||||.||.||..|||..||||||||.||.|||.|.|||||.||
BPUM_1457___c 844 TTTCATAAACATGTGGTGAAAAAAATGCTGAAAGTGTGGGTAGTATCACC 893
BSNT_02566___ 894 GTTTTTATC------TTTATCGATTTCTTATCTGCTTGT-ATCCTTGTTT 936
.|||||||| |.||||| |||.||||.|| |.|||| ||.
BPUM_1457___c 894 CTTTTTATCACTTAGTCTATCG------TATTTGCTAGTGAGCCTT-TTC 936
BSNT_02566___ 937 TTAAAAGCAGATTATTATTCGATCTTTATCATGGTAAGTGTGCTTTTAGC 986
||||||...||.|||||.||.||||||||||||.|.|||||.||
BPUM_1457___c 937 TTAAAAAGTGACTATTACTCTATCTTTATCATGATGAGTGTACT------ 980
BSNT_02566___ 987 GGCGGGC-------GGTGCCGTCAGCCTGACAAAGGCCATTCGTAAA-GA 1028
||..|| |||||..|.||.||||..|||| ||.||..||| ||
BPUM_1457___c 981 -GCTTGCCTCACTTGGTGCGCTAAGTCTGATGAAGG-CAGTCAAAAATGA 1028
BSNT_02566___ 1029 GAGACGCTCAGTCCACGAACAAGGCGGGGGAATCTGA 1065
|||..||||..|.||.|||||.|||||.||.||.|.|
BPUM_1457___c 1029 GAGCAGCTCGATTCATGAACAGGGCGGCGGGATTTAA 1065
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.